Pairwise Alignments

Query, 355 a.a., DNA polymerase IV (RefSeq) from Shewanella amazonensis SB2B

Subject, 362 a.a., DNA polymerase IV from Ralstonia solanacearum GMI1000

 Score =  316 bits (809), Expect = 7e-91
 Identities = 166/337 (49%), Positives = 226/337 (67%), Gaps = 1/337 (0%)

Query: 1   MRKIIHIDMDCYFAAVEMRDFPQYRGKPLAVGGSSDRRGVISTCNYEARAFGVRSAMASA 60
           +RKIIH D DC++AA+EMRD P+  G+PLAVGG  +RRGV++TCNYEAR FG+ SAM  A
Sbjct: 6   VRKIIHCDCDCFYAAIEMRDDPRLVGRPLAVGGRPERRGVVATCNYEARKFGIHSAMPMA 65

Query: 61  YALKLCPNLILVPGRMEVYKAVSQQIREIFSRYTSLIEPLSLDEAYLDVSDCSLYQGSAT 120
            A+K CP+L++VP  M+ Y+ V++QI  I+  YT L+EPLSLDEAYLDV+D  +  GS T
Sbjct: 66  QAVKRCPDLLIVPPAMDKYRQVARQIFAIYQGYTPLVEPLSLDEAYLDVTDSPMLAGSGT 125

Query: 121 RIAEAIRSDIFKETGLTASAGVSPIKFVAKVASDLNKPNGQYVVSPDTLMHFVRALSLGK 180
           RIAE IR  + +E G+T SAGV+P KF+AK+ASD NKP+G +VV P+ +  FV AL + +
Sbjct: 126 RIAEDIRRRVREEIGITVSAGVAPNKFIAKIASDWNKPDGLFVVRPEQVDAFVAALPVER 185

Query: 181 IPGVGKVTEEKLNALGLKTCADVQQVPQTLLTEHFGKFGAVLYERAHGRDERAIVSHRER 240
           + GVGKVT  KL  LG +TC D++      L +HFG FG  L++   G D R +   + R
Sbjct: 186 LFGVGKVTAAKLRRLGAQTCGDLRGWGADRLQQHFGSFGFRLHDLCRGIDHRQVQPSQIR 245

Query: 241 KSVGVETTLPKDLHTREACLDVLSSLIPELNRRLGRSASGRRIHKLVVKLKFDDFRQTTI 300
           KSV VE T   DL T + C   L+ L+ +L  R+ R+ +G  IHK  VKL+F DFR TT+
Sbjct: 246 KSVSVEETYATDLRTLDDCQRELTILVDQLAARVERARAGDMIHKTFVKLRFADFRGTTV 305

Query: 301 ESRAEEPSVRLFESLLSQAFVRAEGRGIRLVGIAAGL 337
           E    + ++ +F  LL+Q F R     +RL+G+   L
Sbjct: 306 ECVYPQVALPVFNRLLAQGFERRR-MPVRLLGVGVRL 341