Pairwise Alignments

Query, 203 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 206 a.a., membrane protein from Burkholderia phytofirmans PsJN

 Score =  116 bits (291), Expect = 2e-31
 Identities = 73/191 (38%), Positives = 103/191 (53%), Gaps = 3/191 (1%)

Query: 6   IGILAEAMTGALAAGRKQMDLFGVVIIGLVTAIGGGTLRDMLLGNYPLIWIANWHYLIAI 65
           + I A A++G + A  +++D  G  ++ + TA GGGTLRD+LL   P  W+ +  YLIAI
Sbjct: 15  LAIFAYAISGFIEARTRRLDAVGTFLVAIATAFGGGTLRDVLLERRPFYWVEHQGYLIAI 74

Query: 66  AAASLL--TVLIAPLMRYLGRLFLAIDALGLAVFSITGAQKTLMLGYSPVVAVAMGVVTG 123
              SL   T+L      +  R+ L  DA+GL +FSI G             +V MGV+TG
Sbjct: 75  FVMSLFAPTLLKMTSRLFSERVLLVADAIGLGLFSIGGTSIAHDAQMPWFTSVMMGVLTG 134

Query: 124 VFGGVLRDILCNEIPLIFR-REFYALASLLTASLYVLLALSGFGGWPSLLGCLLLGFGLR 182
           VFGGV+RD+LCNE+PLI R    YA  + +   LYVLL    F    S+L         R
Sbjct: 135 VFGGVIRDVLCNEVPLILRDSRPYATCAFVGCWLYVLLDYIEFDTVYSVLIATAFILLAR 194

Query: 183 MCAIRYHWSMP 193
           +   R++  +P
Sbjct: 195 LLTFRFNVRLP 205



 Score = 28.1 bits (61), Expect = 1e-04
 Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 3/77 (3%)

Query: 84  RLFLAI---DALGLAVFSITGAQKTLMLGYSPVVAVAMGVVTGVFGGVLRDILCNEIPLI 140
           RL LA+   +AL +  ++I+G  +        V    + + T   GG LRD+L    P  
Sbjct: 4   RLTLALTIMEALAIFAYAISGFIEARTRRLDAVGTFLVAIATAFGGGTLRDVLLERRPFY 63

Query: 141 FRREFYALASLLTASLY 157
           +      L ++   SL+
Sbjct: 64  WVEHQGYLIAIFVMSLF 80