Pairwise Alignments

Query, 443 a.a., multi anti extrusion protein MatE (RefSeq) from Shewanella amazonensis SB2B

Subject, 452 a.a., conserved hypothetical protein, putative membrane protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 90.5 bits (223), Expect = 1e-22
 Identities = 87/352 (24%), Positives = 148/352 (42%), Gaps = 20/352 (5%)

Query: 1   MNHTQAMLEAPVSRLFWRYTLPTIASMLVTGIYVTIDGMFVGHFLGETGLAGIMLAYPVG 60
           M  ++ M   P   L + +TLP +   L+   Y  +D   VG FLG   LA       VG
Sbjct: 1   MATSKEMTAGPALPLIFNFTLPLLFGNLLQQTYSLVDAAIVGKFLGINALAS------VG 54

Query: 61  ALLYAVGALIGM------GAGALVSIKLGEGKTAKARELLGNAFSLVLLSALFFTLVGSV 114
           A    V  ++G       G G  V+ K G    +  R  +  +  L ++ ++   +  S+
Sbjct: 55  ASTSVVFLILGFCNGCCGGFGIPVAQKFGARDYSTMRSYVSVSLQLAVVMSVVIAIFTSI 114

Query: 115 SARHILIWLGAEGEVLESAHDYLFWYFALCIFPLISMAFSTLLRNDGKPAFVTWVLIAGG 174
               IL  +     + E A+ YL   F            S+++R  G      + L+   
Sbjct: 115 YCADILKMMRTPENIFEGAYAYLLVTFIGIPCTFFYNLLSSIIRALGDSKTPFYFLVLAT 174

Query: 175 VINTLLDYLFIVVWDFGLAGASVATMLSQAVTGLLCLQHFFSGKTALRIDFEQMRLKLDN 234
           V+N +LD   I+V  +G+ GA++AT+ SQ V+  LC  + +     LR   ++ + +   
Sbjct: 175 VLNIILDLFCILVLGWGVMGAAIATVFSQGVSAFLCYVYMYRKFDILRGTPKERKYQSKL 234

Query: 235 CLNISRVGLPSLL---MNLYLSIVLTLHNTALLWVGTPLHVAAYGVVSYTEAFFYLIFEG 291
              +  +G+P  L   +    SI+L   N AL   GT   VAA+      + FF    E 
Sbjct: 235 AKTLLSIGVPMGLQFSITAIGSIMLQSANNAL---GTAC-VAAFTSAMRIKMFFLCPLES 290

Query: 292 IALGSQPVLSFNAGAGRMDRV-RQTRNLAMAVTLLTAGLGLLFIYGRPEWAL 342
           + +        N GAG+ +R+    +   + + + TA   L+ + G   +AL
Sbjct: 291 LGMAMATFSGQNYGAGKPERIWSGIKASTLMMVIYTAVTFLILMLGAKSFAL 342