Pairwise Alignments

Query, 443 a.a., multi anti extrusion protein MatE (RefSeq) from Shewanella amazonensis SB2B

Subject, 451 a.a., putative transmembrane cation efflux protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  171 bits (433), Expect = 4e-47
 Identities = 109/434 (25%), Positives = 213/434 (49%), Gaps = 20/434 (4%)

Query: 12  VSRLFWRYTLPTIASMLVTGIYVTIDGMFVGHFLGETGLAGIMLAYPVGALLYAVGALIG 71
           +S LF +  +PT+  M+ + I+V  DG+FVG  +G   LA + +  P+  +   +G + G
Sbjct: 12  ISTLFRKLLVPTVLGMVFSAIFVITDGIFVGKGIGSDALAAVNITAPLFMIATGIGLMFG 71

Query: 72  MGAGALVSIKLGEGKTAKA-----RELLGNAFSLVLLSALFFTLVGSVSARHILIWLGAE 126
           +G   + SI L +GK   A     + L+ + F ++++SAL F  VG +        LG+ 
Sbjct: 72  VGGSVVASIYLSQGKRKAANINITQALVFSTFIVLVMSALCFCFVGPLGC-----LLGSS 126

Query: 127 GEVLESAHDYLFWYFALCIFPLISMAFSTLLRNDGKPAFVTWVLIAGGVINTLLDYLFIV 186
             +L    +Y+ WY    +F  +       +R DG P +         + N + DY+FI 
Sbjct: 127 DRLLPLVIEYMIWYLPFLVFYELLSTGMFFIRLDGSPNYAMMCNAIAAIFNIIFDYIFIF 186

Query: 187 VWDFGLAGASVATMLSQAVTGLLCLQHF--FSGKTAL---RIDFEQMRLKLDNCLNISRV 241
            + +G+ GA+ AT L   V GL+ + +   FS    L   ++  + + L L N   + ++
Sbjct: 187 EFGWGMMGAAFATSLGTVVGGLMTVIYLTRFSRNIHLHRIKLSLKSLMLTLRNGGYMIKL 246

Query: 242 GLPSLLMNLYLSIVLTLHNTALLWVGTPLHVAAYGVVSYTEAFFYLIFEGIALGSQPVLS 301
           G  + +    ++ ++ L N   +       VAA+ +  Y     ++++  IA  +QP++S
Sbjct: 247 GTSAFISEASIACMMFLGNYVFIHHLGEDGVAAFSIACYFFPIIFMVYNAIAQSAQPIIS 306

Query: 302 FNAGAGRMDRVRQTRNLAMAVTLLTAGLGLLFIYGRPEWALYIFAGDNPVLSPVAIEGMR 361
           +N GAG+ DRVR+  +LA+   L+      +  +   +  + +F   +     +A+ G+ 
Sbjct: 307 YNFGAGQPDRVRKALHLAIRTALICGISFFIITFLCRQNIVSLFIDRSCPAFDIAVNGIP 366

Query: 362 LYFWGLPFEGLILVGASFFQAINKPREASILT---GTKLLLIAAVIYSFAWLFGVPGVWV 418
            +  G  F    ++G  ++Q+I + + A+I+T   G   +LI    +    + GVPG+W+
Sbjct: 367 YFGVGFIFFAANMIGIGYYQSIRRGQRATIITLLRGVVFMLIG--FFVLPLVLGVPGIWL 424

Query: 419 SLACVSSVLTLWMV 432
           +++    + TL+++
Sbjct: 425 AVSLAELLTTLYII 438