Pairwise Alignments

Query, 866 a.a., TonB-dependent receptor (RefSeq) from Shewanella amazonensis SB2B

Subject, 1060 a.a., TonB dependent receptor/Secretin and TonB N terminus short domain/TonB-dependent Receptor Plug Domain from Sphingomonas koreensis DSMZ 15582

 Score =  147 bits (372), Expect = 3e-39
 Identities = 198/819 (24%), Positives = 325/819 (39%), Gaps = 143/819 (17%)

Query: 15  LSALTIAMAHAADDDKAISAESKLEKIQITGSRL-KGVDMEGANPLQSFDQEELVKRGYD 73
           + A++ A   AA D++  + +     + +TGSR+ + V  + A P+   ++E++   G  
Sbjct: 109 VEAVSGAPRPAASDEQDDAGD-----VIVTGSRIARQVVTDSAVPIVQINEEDIQSSGAT 163

Query: 74  TIAEFLKDLPQAASAGTFTETGGVGGADGAPAGAAGVSLRGLGSSSTLVLVNGRRVAVDS 133
            ++E L D P    +     +     A    AG + VSLRGLG+  TL L++GRR   + 
Sbjct: 164 ELSEVLADYPAVTPSLNLANSNSQINA----AGTSSVSLRGLGADRTLTLIDGRRTVSNR 219

Query: 134 FSNGSDSFVNVNAIPMAAIERIDVLTDGASSIYGSDAIAGVINFILRKDFVGHELTAQYG 193
            ++   S V++++IP   +ER++V+T GAS++YGSDAIAGV+N I R+ + G  +  + G
Sbjct: 220 ITS---SAVSLSSIPAMFVERVEVITGGASAVYGSDAIAGVVNIITRRKYDGIRVGGRAG 276

Query: 194 NDTSDHDASRTGLTYAGGFATDNTNTTVVL--DYAKRNAIFNSDRPIKVTYTSYTEMVID 251
             +S+ D+ R  L    G    +   ++VL   Y K + +    R   +   +Y+ +  D
Sbjct: 277 -ISSEGDSQRLNLDLLVGQKLFDDRVSLVLGASYEKEDGVMGYQRARALDSVAYS-LSAD 334

Query: 252 GNYYAEDWCG----------------DDTRWGGEACNYD-----------YVIQRAIQPD 284
            N   +   G                  +  GG    YD            V     +PD
Sbjct: 335 SNPLNQGELGITRPSKSSSTPGGRFLSSSTAGGGYFVYDANGTLFRSTSTAVYGWETRPD 394

Query: 285 FENLGATLNH------QWQLDNDMTFFAEAMYQQ---------NTGHAYEAPAGYTVT-- 327
            +      ++         L +D+ FF +  Y +             AY+   G  +   
Sbjct: 395 LQISAPRTSYLAAGKITVDLGSDIEFFGQVQYSKVKTSAERGGAETAAYDEEFGDPLAPD 454

Query: 328 ----VPGDAAYVPGYVRDINAADGDDSNSIRVRTRMPERRIQEYDTESYRVLAGLRGEWG 383
               +  +  YVP  +R   AA        R    +   RI   D E++R   GLRG+ G
Sbjct: 455 VVGRIARNNPYVPTAIR--AAASSSGIQWSRRFNELGHYRILN-DRETWRAWTGLRGKVG 511

Query: 384 D-WGWESAASYGKSTNEVTHV--------------------AGYMNRDALADAIA-SGSF 421
           + W WE +  YG+   E   V                     G ++R    DA A +   
Sbjct: 512 ERWNWEISYGYGRFHQEQNRVNLLNLQNLKYAINAEFDPAAPGDLSRVRCVDAAARAAGC 571

Query: 422 NPFNLGMDNSEEAIAA--LRDSAIRRGESEVMSLDANISGELFEMDAGLVSAVFGAELRS 479
            P NL   NS  + AA  +R      G  +   +   +SG LFE+ AG VS   G E R 
Sbjct: 572 VPVNLFGPNSITSAAANYIRADLKLDGLMQQDVVQGFLSGALFELPAGPVSIALGGEYRR 631

Query: 480 EEIVDNPAASAVNDDVIGLGASDAA------ADRTQYALYGEINLPLF------EGLDLI 527
           +         +V DD    G   A+       D      + E+ +P+F        L L 
Sbjct: 632 D------WQRSVTDDTTRRGFGSASFIAEYEGDIKAKEAFAEVKVPVFREQPFAHSLSLD 685

Query: 528 TALRYDHYS----------DFGGDINPKVSLRYKATDDLVLRASWSTGFRAP------SL 571
            A+RY  Y+           FGG+  P   +R++       RA   T   +P      S+
Sbjct: 686 AAVRYGDYNIKNVGSVLSYRFGGEWAPVRDIRFRGQYARAQRAPTVTNLYSPARDDSDSV 745

Query: 572 SQLGAG---TSLGSQYINCGAGEPFNALCGTNGA-IDGELEFDQETIGNKGLDAESSEAI 627
             L +G   T+ G+   NC +     A    NG  +      +    GN  L  E+++ +
Sbjct: 746 VDLCSGVTATTTGTIATNCRSIAGVAAEIAANGVFLQDTTSIEGPAAGNPDLKEETADTL 805

Query: 628 NAG--LSWNLTDNWQLTVDYWRYDHEDIV-DIDASTTLNACVKGTAPVVGSVSELKGEFG 684
           + G  L+        +TVDY+R    D++  +DA   L  C       +G+   +   F 
Sbjct: 806 SFGAVLTPRFIPGLSMTVDYFRIKIRDVISSLDAVDLLREC-------LGNPGGITNNFF 858

Query: 685 C---VIDGNGDISFLRTGYFNVGSQTTDGLDYRMTYRLE 720
           C     +  G I+ +     N+      G D  + YR +
Sbjct: 859 CNEITRNAEGQITRIINRDLNLTQTVRSGADVAIDYRFD 897