Pairwise Alignments

Query, 479 a.a., transporter, putative (RefSeq) from Shewanella amazonensis SB2B

Subject, 579 a.a., extracellular solute-binding protein family 1 (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 42.7 bits (99), Expect = 3e-08
 Identities = 45/206 (21%), Positives = 77/206 (37%), Gaps = 39/206 (18%)

Query: 149 GEVHAIPYNNYVMGNHFRRDLFENADEQKHFLERYGYPLKAPDTLVQLKDIAEFFTRKPG 208
           G ++ +P   +     FR+D F++   +  F E+YGY L  P      +DIAEFFT    
Sbjct: 173 GNLYQLPDQQFANLYWFRKDWFDDEANKAAFKEKYGYELGVPVNWSAYEDIAEFFTNDVQ 232

Query: 209 DVLAGKLLKQPFYGVALMSGNKPHINDEFSAILWSMGDRWFT-----PVYEDNG------ 257
           ++   ++     YG        P +        W M D W +      V E NG      
Sbjct: 233 EIDGVRIYGHMDYG-----KRAPDLG-------WRMTDAWLSMAGAGDVGEPNGVPVDEW 280

Query: 258 --------------RLNHFEVSRNLDKKLQVANYYQSIKPFAIPADDAFAFNEAADALAN 303
                          +     +        +  + + ++ +A P   ++ F ++  AL+ 
Sbjct: 281 GIRMEAGTCNPVGASVTRGGAANGPAAVYAIRKWDEWLRNYAPPGAASYDFYQSLPALSQ 340

Query: 304 GRVAMWPFAYNNLWLKSAVVEKKVEG 329
           G VA   F Y      + +V+ K EG
Sbjct: 341 GNVAQQIFWYTA--FTADMVKPKSEG 364