Pairwise Alignments

Query, 479 a.a., transporter, putative (RefSeq) from Shewanella amazonensis SB2B

Subject, 440 a.a., ABC transporter for D-Sorbitol, periplasmic substrate-binding component (from data) from Burkholderia phytofirmans PsJN

 Score = 66.6 bits (161), Expect = 2e-15
 Identities = 77/334 (23%), Positives = 136/334 (40%), Gaps = 53/334 (15%)

Query: 50  DYLQTKMLPAFTRQTGIEVKVVSTQLDDMFNLQQAS--LRMAKGEFDLLSMEAGWAKEWA 107
           D ++ K L     +   ++K+    L++    Q+A+  +    G+FD++++ A    +W 
Sbjct: 38  DMIELKKLSPEFEKANPDIKLNWVILEENVLRQRATTDITTGSGQFDVMTIGAYETPQWG 97

Query: 108 ANGYTVPLEELAGLYDPGGTKAMSRYLEPYYPSLLSILSYRGEVHAIPYNNYVMGNHFRR 167
             G+  PL  L   YD          L     +    LS  G+++A+P+       ++R+
Sbjct: 98  KRGWLTPLTNLPADYD----------LNDVVKTARDGLSSGGQLYALPFYVESSMTYYRK 147

Query: 168 DLFENADEQKHFLERYGYPLKAPD--TLVQLKDIAEFFTRKPGDVLAGKLLKQPFYGVAL 225
           DLFE A             LK PD  T  Q+K  A+  T K   +    L  +  +G  +
Sbjct: 148 DLFEKAG------------LKMPDQPTYDQIKQFADKLTDKANGIYGICLRGKAGWGENM 195

Query: 226 MSGNKPHINDEFSAILWSMGDRWFTPVYEDNGRLNHFEVSRNLDKKLQVANYYQSIKPFA 285
             G         + ++ + G RWF   +  N +L       + + K  +  Y   +K   
Sbjct: 196 AYG---------TTVVNTFGGRWFDEKW--NAQLT------SPEWKKAMTFYVDLLKKDG 238

Query: 286 IPADDAFAFNEAADALANGRVAMWPFA-------YNNLWLKSAVVEKKVEGARLDVAQVA 338
            P   +  FNE    +++G+ AMW  A       YN    + + +  KV  A   VA   
Sbjct: 239 PPGASSNGFNENLTLMSSGKCAMWIDATVAAGMLYNK---QQSQIADKVGFAAAPVAVTP 295

Query: 339 GGKPYVGAYAFAVSYDSRNPEAAYWLLKYMGSFQ 372
            G  ++ A+A A+   S+  +AA   + +  S Q
Sbjct: 296 KGSHWLWAWALAIPKSSKQADAAKKFITWATSKQ 329