Pairwise Alignments

Query, 242 a.a., flagellar basal body rod modification protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 229 a.a., Flagellar hook capping protein (NCBI) from Rhodospirillum rubrum S1H

 Score = 65.5 bits (158), Expect = 9e-16
 Identities = 54/229 (23%), Positives = 104/229 (45%), Gaps = 18/229 (7%)

Query: 7   ISQASAAQSTQSTGNPFLDSVRLQTKEAVPEAKKQELTQEDFFALLSQQLSMQDPFKPVE 66
           +S  ++  ST+++G          T  +     K +   + F  +L+ QL  Q+P  P +
Sbjct: 1   MSTITSTSSTETSGKA--------TSTSAESLSKLDENYKLFLTVLTTQLKNQNPLNPTD 52

Query: 67  NDQMIAQMASFSTVDGIANLNDHIVNLNTVMTSSQALQASGLVGQKVLIPSASGHVSAEE 126
            ++M  Q+ S+S V+     N ++ NL     +  A  A   VG++V+  S +   S E+
Sbjct: 53  PNEMTQQLISYSQVEQQILGNQYLENLVLSTNNQTAETALAFVGKEVVYTSDNREFSGEK 112

Query: 127 PNLKGVISTSKPIETIMVRIEDDKGQLVKTFSVDGSDGGNIDVNWDGLDAEGKPVADGTY 186
            + K  +  S   +++   + + KG ++ +   +  + G     WDG    G    DG+Y
Sbjct: 113 IDWKMTVPES--AKSVSFVVTNAKGDVIYS-KTETPESGAYTFTWDGATTAGSKAVDGSY 169

Query: 187 TIKASGRV-DGKAEELPVSTYAHVTSV--SLGTA----ATGAILNLRGI 228
           T+ A   + D K + + + + + V  V  S G A    A G++++L  I
Sbjct: 170 TLTAKATLADDKTKTIDLQSTSTVAEVDWSSGAAQLKLANGSLISLSNI 218