Pairwise Alignments

Query, 638 a.a., flagellar hook-associated protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 624 a.a., flagellar hook-associated protein FlgK from Vibrio cholerae E7946 ATCC 55056

 Score =  312 bits (800), Expect = 2e-89
 Identities = 197/639 (30%), Positives = 323/639 (50%), Gaps = 21/639 (3%)

Query: 1   MSIDLLNIARTGVLASQAQLGVTSNNIANVNTEGYNRQVATQATHLSQRSGNSFYGTGTY 60
           M+ DLLN+    VL +Q QL  T +NI+NVNTEGY+RQ   Q T+  ++ G   YG G +
Sbjct: 1   MASDLLNVGTQSVLTAQRQLNTTGHNISNVNTEGYSRQSVIQGTNAPRQYGGETYGMGVH 60

Query: 61  VSSVKRVYNEYAARELRIGQTAKGAAEVSHTKMSELDQLFSQI-GKAIPQSLNDMFKNIN 119
           V +V+R ++++A +EL I  T       +   +  L +L S +  K IP++LN+ F ++ 
Sbjct: 61  VENVRRSWDQFAVKELNIASTDYAFKRDTEENLDMLSKLLSSVASKKIPENLNEWFDSVK 120

Query: 120 SLADLPSDLGIRGGVLGSAQQMASAINEMQRQLEGQMKQTHEQIDAITTRVNEISTELAN 179
           SLAD P+DLG R  VL  ++ ++  +N+    +  Q   T++ +     R+N+++ E+ +
Sbjct: 121 SLADSPNDLGARKVVLEKSKLISQNLNDFHETVRLQKDITNKGLALGVERINQLALEIRD 180

Query: 180 INRELMKTMGEDMQLLDKQDALIMELSEYAQVNVIPLENG-AKSIMLGGAVMLVSAEVAM 238
           + R +M+  G    L+DK + L+ ELS+Y +V V   ++G   +I +G    LVS   A 
Sbjct: 181 LQRLMMRVPGPHNDLMDKHEKLVSELSQYTKVTVTQRKHGEGFNIHIGNGHTLVSGTEAS 240

Query: 239 SMGTAQGDPYSDELRLTATTGSSTLVVDPSKLGGQLSALYEFRDKTLIPAENELGQLSLG 298
            +    G P + + RL    G +   +    +GG++ A+ + RD+ +    +E+G+L+L 
Sbjct: 241 QLRVIDGFPDTQQHRLAMVEGKALKAISARDIGGKMEAILDMRDEHIPYLMDEVGRLALS 300

Query: 299 IANAFNEAQKAGFDMNGQVGSNIFIDINDPLIAQSRVGQYGSNTGTASLSVSIEDVGALS 358
            ++  N  Q  G D+ G VGS +F D+N  +IA+SRV    ++   A ++V IEDV  L 
Sbjct: 301 FSHEVNTLQSQGLDLRGNVGSALFTDVNLDVIARSRV--VTNSNSKADMAVFIEDVSQLK 358

Query: 359 GGAYELKYTAPGTYELTDTLTGDVTPL-TLSGSTLTGGAGFNINIGAGAFADGDRFLIRP 417
           GG Y ++Y   G+  +    +G  T L  + G+    G    +         G+R L+RP
Sbjct: 359 GGEYSMQYN--GSEFVVTLPSGQQTVLPVVKGNVYVDGLRVEVRNPPQV---GERILVRP 413

Query: 418 TSGAAAQMSVVMTDPKAIAAAAPKITADATNSGNTKVTVTSIDNRLAANFPVTGSELTFT 477
           T   AA + +   D   IAA + + +      G  K  +    +           E    
Sbjct: 414 TRNGAAAIRLATEDATKIAAQSFEASTTFA-QGKAKFKILQAGD---------VREFEVI 463

Query: 478 LNTGANTYDVTAADGTVLAAGVAYTPPS-ISAFGFTFEVESIGAATDSFTFDLSYGEGDN 536
           ++   + + VT   G +L     Y P   ++  G TFE+       D FT +L   EGDN
Sbjct: 464 VSPTGDQFAVTDTKGNILLQPQPYPPTGPVTVLGTTFELTEGALPNDKFTANLVPSEGDN 523

Query: 537 SNALAMAQLADTKLMNGGKSTLIDVFEKTKQQIGSGTKAAEVRLGSAEAIYQQAYGRVQE 596
            N   M  +   K MN  +ST+ID++      +G            A    + A  R+  
Sbjct: 524 GNLRKMINIQTAKRMNDNESTIIDLYHNLNTDVGLKMATMTRLTDVARLEKEAAQSRIAS 583

Query: 597 VSGVNLDEEAANLLRFQQSYQASARIMTTAQQIFDTLFA 635
           +SGVNLDEEAAN+++FQQ+Y AS+RI+  +   F+T+ A
Sbjct: 584 ISGVNLDEEAANMMKFQQAYMASSRIIQASNDTFNTILA 622