Pairwise Alignments

Query, 272 a.a., flagellin-like protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 298 a.a., flagellin domain protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  180 bits (456), Expect = 4e-50
 Identities = 110/296 (37%), Positives = 162/296 (54%), Gaps = 24/296 (8%)

Query: 1   MAITVNTNVTSMKAQKNLTLSNRDLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRG 60
           M++ +N N+ ++ A +NL  S   LATS  RLSSGLR+ +A DDAAGLAI   + + +  
Sbjct: 1   MSLVINHNMMALNASRNLNESYGRLATSTRRLSSGLRVGTAADDAAGLAIRELMRADIST 60

Query: 61  LEVGMRNANDAISIAQIAEGAMQEQTNMLQRMRDLSIQAENGANSADDLTSLKNEMDQLA 120
           +  G+RNANDAIS+ Q A+GA+Q     L RM++L+ QA  G  ++D    +++E   +A
Sbjct: 61  MRQGVRNANDAISMIQTADGALQIIDEKLIRMKELAEQAATGTYNSDQRLMIESEYQAMA 120

Query: 121 LEITAIGNTTAFGDTKLMTGGFSNGK-------------KFQVGHQNAEDV--------- 158
            EIT I N T F    L+ G  S                 F  G+ + ED          
Sbjct: 121 SEITRIANATDFNGIHLLDGTLSGTHDGSGLRQTGELKIHFGTGNDSNEDYYYIKIGGAT 180

Query: 159 --TVTVKTNNAGTLSVGALDVTTSGGRSTAMLKIDAAIKSIDTQRASLGAIQNRLAHNIS 216
              + +   +A   + G   ++T      A+  +D AI S D  RA+LGA+QNRL + IS
Sbjct: 181 ASQLGIGNASASGAAAGGYTISTQSAAQNALTALDQAIISKDKIRAALGALQNRLENTIS 240

Query: 217 NSANTQANVADAKSRIVDVDFAKETSTMTKNQVLQQTGSAMLAQANQLPQIALSLL 272
           N      N+  ++SRI DVD A+E +   +NQ+L Q+  AML+QAN LPQ+A+ L+
Sbjct: 241 NLTIQAENLQSSESRISDVDVAEEMTEFVRNQILTQSAVAMLSQANSLPQMAMKLI 296