Pairwise Alignments

Query, 272 a.a., flagellin-like protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 485 a.a., Flagellin and related hook-associated proteins from Sphingomonas koreensis DSMZ 15582

 Score =  142 bits (358), Expect = 1e-38
 Identities = 92/247 (37%), Positives = 137/247 (55%), Gaps = 10/247 (4%)

Query: 5   VNTNVTSMKAQKNLTLSNRDLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRGLEVG 64
           + TN+ S++A     +++  L T+MERLS+G RINSAKDDAAGLAI++R+ +QV+ + V 
Sbjct: 4   IGTNIASLRAANASKMASSSLQTAMERLSTGKRINSAKDDAAGLAIASRMTAQVKSMNVA 63

Query: 65  MRNANDAISIAQIAEGAMQEQTNMLQRMRDLSIQAENGANSADDLTSLKNEMDQLALEIT 124
           +RNAND IS+AQ AEGA+ E TNMLQRM++L+ QA NG  S  D ++L+ EM QL  E+ 
Sbjct: 64  IRNANDGISLAQTAEGALGEVTNMLQRMKELATQASNGTLSPSDRSTLQAEMTQLIAEVG 123

Query: 125 AIGNTTAFGDTKLMTGGFSNGKKFQVGHQNAEDVTVTVKTNNAGT--LSVGALDVTTSGG 182
            I  T  F    L+ G  +     Q G    E +++++   ++    L VG     T   
Sbjct: 124 NISKTANFNGVSLLDGK-TGDVTLQTGINAGETISMSMLNTSSEKLGLKVGVEGPVTGTV 182

Query: 183 RSTAMLKIDAAIK------SIDTQRASLGAIQNRL-AHNISNSANTQANVADAKSRIVDV 235
            +T + K +  I       S+DT   +  AI +++ A N   S       A  K+ +  V
Sbjct: 183 ANTGIKKNELQINGTWIGASVDTNGDASSAIADKVTAINAKTSETGVTAAAQTKATLTMV 242

Query: 236 DFAKETS 242
              K T+
Sbjct: 243 GADKNTT 249



 Score = 90.5 bits (223), Expect = 6e-23
 Identities = 67/213 (31%), Positives = 100/213 (46%), Gaps = 23/213 (10%)

Query: 60  GLEVGMRNANDAISIAQIAEGAMQEQTNMLQRMRDLSIQAENGANSADDLTSLKNEMDQL 119
           G+   +  A  AI +   A+   +  T  L + +  +  A       DD T     ++Q+
Sbjct: 295 GVTAALNEAGTAIELTSAADVVFKADTADLAKFKVRAEGASADLAMTDD-TDATVALNQV 353

Query: 120 ALEITAIGNTTAFGDTKLMTGGFSNGKKFQVGHQNAEDVTVTVKTNNAGTLSVGALDVTT 179
            L       T A G+T +            VG + A   ++ +   +A       L + T
Sbjct: 354 VL-------TAAAGETII------------VGGETAAMASIGLTATSA---KGSDLSIAT 391

Query: 180 SGGRSTAMLKIDAAIKSIDTQRASLGAIQNRLAHNISNSANTQANVADAKSRIVDVDFAK 239
               S AM  ID A+  I   R  LGA+QNRL   ++N   T +N+++A+SRI D DF+ 
Sbjct: 392 QDDASAAMKVIDDALTEISAGRGDLGAVQNRLESTVANLTTTTSNLSEARSRIEDADFSA 451

Query: 240 ETSTMTKNQVLQQTGSAMLAQANQLPQIALSLL 272
           ET+ + K Q+L Q  +AMLAQANQ  Q  LSLL
Sbjct: 452 ETTALAKAQILSQASTAMLAQANQSQQNVLSLL 484