Pairwise Alignments

Query, 272 a.a., flagellin-like protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 297 a.a., flagellin (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  183 bits (464), Expect = 4e-51
 Identities = 117/295 (39%), Positives = 164/295 (55%), Gaps = 23/295 (7%)

Query: 1   MAITVNTNVTSMKAQKNLTLSNRDLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRG 60
           M++ +N N+ +M A  NL+ S   L+TS+ RLSSGLR+ +A DDAAGLAI   + S +  
Sbjct: 1   MSLVINHNMMAMNAAGNLSNSYGKLSTSVRRLSSGLRVGTAADDAAGLAIRELMRSDISA 60

Query: 61  LEVGMRNANDAISIAQIAEGAMQEQTNMLQRMRDLSIQAENGANSADDLTSLKNEMDQLA 120
           L  G+RNANDAIS+ Q A+GA+      L RM++L+ QA  G  ++D    + +E   +A
Sbjct: 61  LNQGVRNANDAISLIQTADGALGVIDEKLIRMKELAEQAATGTYTSDQRLIIDSEYQAMA 120

Query: 121 LEITAIGNTTAFGDTKLMTGGFSN-----------GK---KFQVGHQNAED-VTVTVKTN 165
            EIT I N T F    L+ G  S+           GK    F   + +AED   V + T+
Sbjct: 121 SEITRIANATDFNGLHLLNGNLSSDTHDGSGLQSTGKMKIHFGTANDSAEDYYYVQIGTS 180

Query: 166 NAGTLSVG--------ALDVTTSGGRSTAMLKIDAAIKSIDTQRASLGAIQNRLAHNISN 217
            A  L VG           ++T      A++ I  AI S D  RASLGA+QNRL + ISN
Sbjct: 181 TASALGVGNQATAGSAGYTISTQSAAQQALVAIQNAIISKDNIRASLGALQNRLENTISN 240

Query: 218 SANTQANVADAKSRIVDVDFAKETSTMTKNQVLQQTGSAMLAQANQLPQIALSLL 272
                 N+  A+SRI DVD + E +   + Q+L Q+  AML+QAN LP++A+ LL
Sbjct: 241 LRTQAENLQSAESRISDVDVSSEMTEFVRQQILTQSAVAMLSQANSLPRMAMQLL 295