Pairwise Alignments

Query, 272 a.a., flagellin-like protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 297 a.a., flagellin, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  172 bits (435), Expect = 1e-47
 Identities = 113/295 (38%), Positives = 162/295 (54%), Gaps = 23/295 (7%)

Query: 1   MAITVNTNVTSMKAQKNLTLSNRDLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRG 60
           M++ +N N+ +  A +NL  S   L+TS+ RLSSGLR+ +A DDAAGLA+   + + +  
Sbjct: 1   MSLVINHNLMAQNASRNLGDSYTKLSTSVRRLSSGLRVGNAADDAAGLAVRELMRADIAA 60

Query: 61  LEVGMRNANDAISIAQIAEGAMQEQTNMLQRMRDLSIQAENGANSADDLTSLKNEMDQLA 120
           L  G+RNANDAIS+ Q A+GA+      L RM++L+ QA  G  ++D    + +E   +A
Sbjct: 61  LSQGVRNANDAISMIQTADGALGVIDEKLIRMKELAEQAATGTYTSDQRLIIDSEYQAMA 120

Query: 121 LEITAIGNTTAF-----------GDTKLMTGGFSNGK---KFQVGHQNAED-VTVTVKTN 165
            EIT I   T F           GDT   +G  S GK    F   + ++ED   V +   
Sbjct: 121 SEITRIAKMTDFNGVYLLNGNLSGDTHSGSGLQSTGKMKVHFGTANDSSEDYYYVQINAA 180

Query: 166 NAGTLSVG--------ALDVTTSGGRSTAMLKIDAAIKSIDTQRASLGAIQNRLAHNISN 217
            +  L VG        A  ++T      A+  +  AI S D  RASLGA+QNRL + ISN
Sbjct: 181 TSSALGVGTEAGSTAKAYSISTQSAAQAALEGLTNAIVSKDKIRASLGALQNRLENTISN 240

Query: 218 SANTQANVADAKSRIVDVDFAKETSTMTKNQVLQQTGSAMLAQANQLPQIALSLL 272
                 N+  A+SRI DVD + E +   + Q+L Q+  AML+QAN LP++AL+LL
Sbjct: 241 LQIQAENLQAAESRISDVDVSMEMTEFVRQQILSQSAVAMLSQANSLPRLALNLL 295