Pairwise Alignments

Query, 272 a.a., flagellin-like protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 298 a.a., flagellin (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  191 bits (486), Expect = 1e-53
 Identities = 121/296 (40%), Positives = 166/296 (56%), Gaps = 24/296 (8%)

Query: 1   MAITVNTNVTSMKAQKNLTLSNRDLATSMERLSSGLRINSAKDDAAGLAISNRLNSQVRG 60
           M++ +N N+ +M A +NLT S   LATS  RLSSGLR+N+A DDAAGLAI   + + +  
Sbjct: 1   MSLVINHNMMAMNAARNLTDSYGRLATSTRRLSSGLRVNTAADDAAGLAIRELMRADIST 60

Query: 61  LEVGMRNANDAISIAQIAEGAMQEQTNMLQRMRDLSIQAENGANSADDLTSLKNEMDQLA 120
           L  G+RNANDAIS+ Q A+GA+Q     L RM++L+ QA  G  ++D    +++E   +A
Sbjct: 61  LRQGIRNANDAISMIQTADGALQIIDEKLIRMKELAEQAATGTYNSDQRLMIESEYQAMA 120

Query: 121 LEITAIGNTTAFGDTKLMTG---GFSNGK----------KFQVGHQNAED---------V 158
            EIT I N T F    L+ G   G  NG            F  G+ +AED          
Sbjct: 121 SEITRIANATDFNGIHLLNGSLSGVHNGSVLQQSGALKIHFGTGNDSAEDYYYIEIGGAT 180

Query: 159 TVTVKTNNAGTL--SVGALDVTTSGGRSTAMLKIDAAIKSIDTQRASLGAIQNRLAHNIS 216
              +   NA  L    G   ++T      A+  ID AI S D  RASLGA+QNRL + IS
Sbjct: 181 ASMLGLGNASALGTEAGGYTISTQSAAQAALAAIDQAIISKDKIRASLGALQNRLENTIS 240

Query: 217 NSANTQANVADAKSRIVDVDFAKETSTMTKNQVLQQTGSAMLAQANQLPQIALSLL 272
           N +    N+  ++SRI DVD A E +   +NQ+L Q+  AML+QAN LPQ+A+ L+
Sbjct: 241 NLSIQAENLQSSESRISDVDVATEMTEFVRNQILTQSAVAMLSQANSLPQMAMKLI 296