Pairwise Alignments

Query, 167 a.a., transcriptional activator rfaH, putative (RefSeq) from Shewanella amazonensis SB2B

Subject, 166 a.a., transcriptional activator rfaH, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  184 bits (468), Expect = 5e-52
 Identities = 92/167 (55%), Positives = 117/167 (70%), Gaps = 3/167 (1%)

Query: 1   MKAWYLIYCKPRNEMRAQQNLSMQNLETYLPKHRKQVKASGGAVSVSESVLFPNYLFVQF 60
           MKAWYL+YCKPR+E+RAQQNL++QNLETYLP   ++ K+  G   +    LFPNYLF+ F
Sbjct: 1   MKAWYLLYCKPRSEVRAQQNLALQNLETYLPMVSEE-KSQRGQKRICRVPLFPNYLFINF 59

Query: 61  DPEVTSVRSIHATRGVSRIVGCSEQMTPIDDALIRALKRKELQVEKLACEKP--LAAGER 118
           DP  TSV+ +H+TRGVSRIV C E+MTPIDD +I A++ KEL   +   + P  L  GE+
Sbjct: 60  DPSQTSVKQVHSTRGVSRIVNCQEKMTPIDDRIIHAIRMKELTPSQSVLDTPLELKTGEK 119

Query: 119 VKFCAGPFSDLEAIFLESDGNKRCQVLFEFMGQQKQLDVESSSIVRI 165
           ++F  GPF+DLEAIF E   NKRC VLF  MGQ   L V   S+ R+
Sbjct: 120 IRFKDGPFADLEAIFQEKCPNKRCHVLFNIMGQINILTVPEQSVERV 166