Pairwise Alignments

Query, 1431 a.a., sensory box protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 828 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) from Pseudomonas syringae pv. syringae B728a

 Score =  377 bits (967), Expect = e-108
 Identities = 219/557 (39%), Positives = 318/557 (57%), Gaps = 7/557 (1%)

Query: 863  KNINNFKQAEEQLRLFERAIENISEGMFILDHEFRFVEVNEACCDICLMDKDSFIGTQ-- 920
            ++I   +Q +E+L L     E+ +EG+ I + +     VN A  +I    +   IG    
Sbjct: 250  RDITESRQMQEKLHLAATVFESTAEGVLITNTDQSISAVNRAFTEITGYSESEAIGKTPR 309

Query: 921  -LQFSCYPDAYSEQVRIILRQQGRWSAEVESRRGDNSTFLMELTVDAIYDEQGTLSHFVG 979
             L    +  A+   +   L  +G W  E+ +RR +   +   LT+ A+ ++   L+HFV 
Sbjct: 310  LLASGQHDSAFYAAMWHQLAAEGHWQGEISNRRKNGELYPSWLTISAVRNKDNLLTHFVA 369

Query: 980  VFSDISRRKQQEEELRKLTNNDLLTGLPNR----SNLQVSLNNLVKKDTHHTLMVLDLDN 1035
            VF+DIS  KQ +  L    ++D LTGLPNR    S LQ +L +  +  +   ++ LDLD 
Sbjct: 370  VFADISSLKQAQARLDYQAHHDPLTGLPNRILFESRLQAALLHSEESGSLGAVLFLDLDR 429

Query: 1036 FKKINDSLGHQVGDELLQLVSRRMSAALPGHTSLYRLGGDEFAVLLDKDPDIGSAAAIAK 1095
            FK INDSLGH VGD LL+ ++ R+   L    ++ RLGGDEF VLL        A AIA 
Sbjct: 430  FKHINDSLGHPVGDLLLKGIAHRLKETLRDIDTVARLGGDEFIVLLPGLLQTSDAQAIAN 489

Query: 1096 GLVDAFVAPFELAGEKLVVGVSIGIVLYPEDEQNEQALLRKADIAMYHAKSAGGNRYQFY 1155
             L+  F  PFE    +L +  SIG  ++P D  +   L++ AD AMY +K+ G NR + Y
Sbjct: 490  KLLACFSTPFEAGEHELYISPSIGSCVFPTDGTDVATLVKNADAAMYRSKAKGRNRVESY 549

Query: 1156 SESLNRNALRQLEVENLIRDGLRDDLFEVYYQPKVDLRNSRMAGMEALVRLNHPTQGLIP 1215
            +  L+  A  ++ +E  +R  L  +   + YQPK+DL    MAG EAL+R NHPT G +P
Sbjct: 550  TCDLSDQASERIALEQELRRALERNQLTLAYQPKIDLLTHTMAGAEALIRWNHPTFGEVP 609

Query: 1216 PSEFIPLAEETGLIVEIGDLVMRKACFAAQRWREQGLFDGRVAVNLSSRQFALTDLQQRI 1275
            P  FIPLAEE G+I++IGD V+ +AC     WR+     G ++VNL+  Q   T+L +RI
Sbjct: 610  PEHFIPLAEENGMILQIGDWVLEQACRQMGIWRKTCQPFGPLSVNLAGAQLRQTNLLERI 669

Query: 1276 ESILRLTKLPAANLELEITEGTVIKQPEKAIKVMQQLAKMGVSLALDDFGTGYSSLSYLK 1335
            E +L    L    L+LEITE  ++ Q ++A+ V+ QL  +GV LA+DDFGTGYSSLSYLK
Sbjct: 670  EQLLTDNGLEPGCLQLEITENFIMSQTQEALAVLHQLKTLGVQLAIDDFGTGYSSLSYLK 729

Query: 1336 RFPIHTLKIDKAFVDDIDKSDRDLKMVDSIITIAHNMGLTVVGEGVEVPSQLNILRALKC 1395
            R P+  LKID++FV  + +   D  +V +II +  ++ LTV+ EGVE   Q   L +  C
Sbjct: 730  RLPLDILKIDQSFVRGLPEDTHDAAIVRAIIALGRSLQLTVIAEGVENSEQQQFLTSEGC 789

Query: 1396 EEVQGYIYSKAVPEAEF 1412
            E++QGYI S  +   EF
Sbjct: 790  EQIQGYIISLPLDAEEF 806