Pairwise Alignments

Query, 1431 a.a., sensory box protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 639 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) from Pseudomonas syringae pv. syringae B728a

 Score =  377 bits (969), Expect = e-108
 Identities = 208/544 (38%), Positives = 324/544 (59%), Gaps = 7/544 (1%)

Query: 869  KQAEEQLRLFERAIENISEGMFILDHEFRFVEVNEACCDICLMDKDSFIG---TQLQFSC 925
            +Q  ++L L     ++  EG+ + D E R V VN A  DI     D  +G   ++ +   
Sbjct: 80   QQDYDRLLLAAVVFDSTREGVLVSDAEGRIVHVNRAFVDITGYQADEVLGFNPSKFKSGR 139

Query: 926  YPDAYSEQVRIILRQQGRWSAEVESRRGDNSTFLMELTVDAIYDEQGTLSHFVGVFSDIS 985
            +   +  Q+   L+  G+WS E+ +RR     +    T+ +I  E G   HFV VFSDI+
Sbjct: 140  HGPEFYRQMYHSLQSAGQWSGEIWNRRKSGEIYPQWQTIRSIKGEDGQPRHFVAVFSDIT 199

Query: 986  RRKQQEEELRKLTNNDLLTGLPNR----SNLQVSLNNLVKKDTHHTLMVLDLDNFKKIND 1041
              K+ E+EL +L + D LT LPNR      +  +L +         L+V+DLDNF+ IND
Sbjct: 200  AIKRSEQELAQLAHYDALTELPNRLLLTDRISQALTSARSSRRGCALLVVDLDNFRNIND 259

Query: 1042 SLGHQVGDELLQLVSRRMSAALPGHTSLYRLGGDEFAVLLDKDPDIGSAAAIAKGLVDAF 1101
            SLGH +GDE+L+  + R++A      ++ RLGGDEFA+L+     +  AAA+A+ +++AF
Sbjct: 260  SLGHNIGDEVLKAAAERLNALADSGMTVSRLGGDEFALLVKNCTHMVHAAALAQQVINAF 319

Query: 1102 VAPFELAGEKLVVGVSIGIVLYPEDEQNEQALLRKADIAMYHAKSAGGNRYQFYSESLNR 1161
             AP+ +AG +L V  SIGI L+P D    + LLR AD A++ AK+ G   +  Y+E L  
Sbjct: 320  KAPYPIAGHQLFVTASIGISLFPGDALTAEQLLRNADSALFKAKTDGREGFALYTEELTA 379

Query: 1162 NALRQLEVENLIRDGLRDDLFEVYYQPKVDLRNSRMAGMEALVRLNHPTQGLIPPSEFIP 1221
             A +++++ + +R  +  D   V+YQP  DL   R+  +EALVR  HPT+G++ P +FIP
Sbjct: 380  QAQQRVQLASELRQAIEQDELRVFYQPVYDLVTGRICAVEALVRWQHPTRGMVSPGDFIP 439

Query: 1222 LAEETGLIVEIGDLVMRKACFAAQRWREQGLFDGRVAVNLSSRQFALTDLQQRIESILRL 1281
            +AE+ GLI +I   V+  AC   Q W  +G+    VAVN+SSR F+  D+ +++  +L  
Sbjct: 440  IAEQNGLIADIDAWVLNTACRQMQAWLAEGVSIASVAVNVSSRLFSRGDVDRQVAEVLNE 499

Query: 1282 TKLPAANLELEITEGTVIKQPEKAIKVMQQLAKMGVSLALDDFGTGYSSLSYLKRFPIHT 1341
            T L  A LELE+TE  V++ PE+AI+ + +L ++G+SLA+DDFGTGYSSL  LK  P+  
Sbjct: 500  TGLDPAFLELEVTESAVMEDPEQAIEQLHRLRELGLSLAIDDFGTGYSSLLRLKSMPVQK 559

Query: 1342 LKIDKAFVDDIDKSDRDLKMVDSIITIAHNMGLTVVGEGVEVPSQLNILRALKCEEVQGY 1401
            LKID+ FV  +     D+ +V ++I +A ++G+ V+ EG+E  +Q + L +  CE  QGY
Sbjct: 560  LKIDQGFVAGLPGDVDDIAIVRAVIALASSLGMRVLAEGIEHANQASFLLSNGCELGQGY 619

Query: 1402 IYSK 1405
             +++
Sbjct: 620  WFAR 623