Pairwise Alignments

Query, 1431 a.a., sensory box protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 651 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  390 bits (1002), Expect = e-112
 Identities = 231/564 (40%), Positives = 324/564 (57%), Gaps = 8/564 (1%)

Query: 856  LRMTGTIKNINNFKQAEEQLRLFERAIENISEGMFILDHEFRFVEVNEACCDICLMDKDS 915
            L  +GT + +   +    +L L         EG+ + D E R   VN A C I    +  
Sbjct: 70   LYRSGTPRELAACRDYVHRLNLASAVFSAAREGIVVTDLEGRVEAVNPAFCQITGYGEAE 129

Query: 916  FIGTQLQF---SCYPDAYSEQVRIILRQQGRWSAEVESRRGDNSTFLMELTVDAIYDEQG 972
              G  L+         A+  Q+   L + G W  E+ +RR +  T+   LT+  + DE  
Sbjct: 130  LQGFNLRLLKSGRQDGAFYRQLWRDLLESGHWQGEIWNRRKNGETYPQWLTISTVRDEAH 189

Query: 973  TLSHFVGVFSDISRRKQQEEELRKLTNNDLLTGLPNRS----NLQVSLNNLVKKDTHHTL 1028
                +VGVF D+S  ++ E++L  L ++D LT LPNR+     L+ +L+   ++     +
Sbjct: 190  QPVSYVGVFLDLSPIRRSEQKLLHLAHHDPLTDLPNRTLFLARLEHALSLSAREGGSGAV 249

Query: 1029 MVLDLDNFKKINDSLGHQVGDELLQLVSRRMSAALPGHTSLYRLGGDEFAVLLDKDPDIG 1088
            + LDLD FK +NDSLGH  GD LL  V+ R+   L    +L RLGGDEF +LL+      
Sbjct: 250  LFLDLDRFKDVNDSLGHPTGDRLLCAVAERLRPCLRESDTLARLGGDEFLLLLETAATPE 309

Query: 1089 SAAAIAKGLVDAFVAPFELAGEKLV-VGVSIGIVLYPEDEQNEQALLRKADIAMYHAKSA 1147
             AA +A+ L++   APF L     V VG SIGI LYP D  N   L++ AD A+Y AK+A
Sbjct: 310  RAAVVAEKLLEQLAAPFRLDDRSEVYVGASIGICLYPADGDNATTLIQHADSALYQAKAA 369

Query: 1148 GGNRYQFYSESLNRNALRQLEVENLIRDGLRDDLFEVYYQPKVDLRNSRMAGMEALVRLN 1207
            G + ++FYSE+  R A  +L +E  +R GL  + F +YYQP+VDLR + + G+EALVR  
Sbjct: 370  GRHTFRFYSEAQTRQADARLALEAALRRGLEKEEFLLYYQPQVDLRTASLEGVEALVRWR 429

Query: 1208 HPTQGLIPPSEFIPLAEETGLIVEIGDLVMRKACFAAQRWREQGLFDGRVAVNLSSRQFA 1267
             P   L+PP+ FIPLAEETGLI+ +G+ V+R+AC   Q+W  +GL   RVAVNLSSRQF 
Sbjct: 430  LPGGELVPPARFIPLAEETGLILPLGEWVLRQACRQMQQWVARGLPIRRVAVNLSSRQFR 489

Query: 1268 LTDLQQRIESILRLTKLPAANLELEITEGTVIKQPEKAIKVMQQLAKMGVSLALDDFGTG 1327
              DL QRI +IL  T L    LELEITE  ++    +    ++ L  MG+ LA+DDFGTG
Sbjct: 490  QADLLQRINAILAETGLAPRYLELEITESLLMDNSAQVDAKLEALEAMGIRLAIDDFGTG 549

Query: 1328 YSSLSYLKRFPIHTLKIDKAFVDDIDKSDRDLKMVDSIITIAHNMGLTVVGEGVEVPSQL 1387
            YSSLSYLKRFP+HTLK+D++F+ DI        +V SII +  ++ + ++ EGVE   Q 
Sbjct: 550  YSSLSYLKRFPLHTLKLDRSFIRDIADDPVSSNIVASIIELGQHLDMDILAEGVETDQQR 609

Query: 1388 NILRALKCEEVQGYIYSKAVPEAE 1411
             IL    C   QGY++S  +P  E
Sbjct: 610  GILLQNGCRTCQGYLFSHPLPAEE 633