Pairwise Alignments

Query, 261 a.a., tRNA pseudouridine synthase A (RefSeq) from Shewanella amazonensis SB2B

Subject, 257 a.a., tRNA pseudouridine synthase A from Phaeobacter inhibens DSM 17395

 Score =  154 bits (388), Expect = 2e-42
 Identities = 97/257 (37%), Positives = 136/257 (52%), Gaps = 19/257 (7%)

Query: 2   RIALGIEYDGSKFYGWQRQAEVNSVQAELERALSIVANEPIEVQCAGRTDAGVHATGQVV 61
           R AL +EY G+ F GWQRQ +  SVQ  +E AL+ +   P  +  AGRTD GVH  GQV 
Sbjct: 3   RFALKVEYHGAPFAGWQRQKDQPSVQGAIEDALARLEPGPHTIAAAGRTDTGVHGLGQVA 62

Query: 62  HFDTNAVRKEGAWTLGVNVHL-PDDIAVRWAMPVNDDFHARFSATARRYRYVIFNHNFRP 120
           H D          +  +N HL P  +A+       DD+HARFSA  R+Y        FR 
Sbjct: 63  HCDMVKDWDPFRLSEALNFHLKPAPVAIVDCARAEDDWHARFSAVERQYL-------FRI 115

Query: 121 GILRKGVSHYHG-------DIDVERMHDAAQALIGERDFTSFRAIGCQSNTPFRNVHKVS 173
            I R   +H  G       D+D   M +AA  LIG+ DFT+FR+  CQ+ +P + + ++ 
Sbjct: 116 LIRRAPATHDAGQVWQLNHDLDAGSMQEAANHLIGQHDFTTFRSSICQAASPLKTLDELR 175

Query: 174 VSR----HGMYIVVDIQANAFLHHMVRNIVGSLLEIGLGNQPLDWMATLLEAKDRSQAAA 229
           + R     G  I   ++A +FLH+ VR+ VG+L  +G G    + + + LEA+DR+    
Sbjct: 176 IERVQGFSGPEIHFHVRARSFLHNQVRSFVGTLERVGAGAWSPEDVKSALEAEDRAACGP 235

Query: 230 TAKPHGLYLVDVTYPES 246
               HGLYL  V YPE+
Sbjct: 236 VCPGHGLYLARVGYPEN 252