Pairwise Alignments

Query, 261 a.a., tRNA pseudouridine synthase A (RefSeq) from Shewanella amazonensis SB2B

Subject, 250 a.a., tRNA pseudouridine(38-40) synthase TruA from Pedobacter sp. GW460-11-11-14-LB5

 Score =  147 bits (372), Expect = 2e-40
 Identities = 93/246 (37%), Positives = 130/246 (52%), Gaps = 6/246 (2%)

Query: 2   RIALGIEYDGSKFYGWQRQAEVNSVQAELERALSIVANEPIEVQCAGRTDAGVHATGQVV 61
           R  + + YDGS ++GWQ Q    +VQ  L++A+S+   + IE    GRTDAGVHAT    
Sbjct: 5   RYFIQLAYDGSLYHGWQTQPNAITVQELLDKAMSVFFRQAIETLGCGRTDAGVHATDFYA 64

Query: 62  HFDTNAVRKEGAWTL--GVNVHLPDDIAVRWAMPVNDDFHARFSATARRYRYVIFNHNFR 119
           HFD   V +        G+N  LP  IA +  +PV+DD HARF ATAR Y+Y +   +F 
Sbjct: 65  HFDVEGVEEAKVLNAVTGINAMLPYQIAAKKIIPVHDDAHARFDATARAYKYYL---HFE 121

Query: 120 PGILRKGVSHYHGD-IDVERMHDAAQALIGERDFTSFRAIGCQSNTPFRNVHKVSVSRHG 178
               +   S    D +D E M+ AA  L+   DF+ F     Q+ T    V K       
Sbjct: 122 KNPFKLNRSWLVKDQLDREAMNSAAALLLNYTDFSCFSKSNTQTFTNNCKVTKAVFEEQE 181

Query: 179 MYIVVDIQANAFLHHMVRNIVGSLLEIGLGNQPLDWMATLLEAKDRSQAAATAKPHGLYL 238
             +V  IQA+ FL +MVR I+G+L++IG     L     ++E+K+RS A  +    GLYL
Sbjct: 182 DGLVFTIQADRFLRNMVRAIMGTLVQIGKKEINLTDFKAIIESKNRSNAGQSVPACGLYL 241

Query: 239 VDVTYP 244
           V + YP
Sbjct: 242 VKIEYP 247