Pairwise Alignments

Query, 261 a.a., tRNA pseudouridine synthase A (RefSeq) from Shewanella amazonensis SB2B

Subject, 274 a.a., tRNA pseudouridine(38-40) synthase TruA from Ralstonia sp. UNC404CL21Col

 Score =  239 bits (609), Expect = 6e-68
 Identities = 123/253 (48%), Positives = 158/253 (62%), Gaps = 4/253 (1%)

Query: 2   RIALGIEYDGSKFYGWQRQAEVNSVQAELERALSIVANEPIEVQCAGRTDAGVHATGQVV 61
           RIALGI+YDG+ F GWQ Q   N+VQ  LE AL   A   +    AGRTDAGVHA GQVV
Sbjct: 3   RIALGIQYDGAAFSGWQSQPHGNTVQDALEAALRQFAGVALPTTVAGRTDAGVHALGQVV 62

Query: 62  HFDTNAVRKEGAWTLGVNVHLPDDIAVRWAMPVNDDFHARFSATARRYRYVIFNHNFRPG 121
           H DT+ VR+  +W  G N  LP  +AVRWA  + DDFHARFSA  R Y Y +     R  
Sbjct: 63  HLDTDLVREPFSWVRGTNAFLPPTVAVRWAQEMPDDFHARFSAHRRTYYYALTFGPTRAP 122

Query: 122 ILRKGVSHYH----GDIDVERMHDAAQALIGERDFTSFRAIGCQSNTPFRNVHKVSVSRH 177
           +L     +        +DV  M++AAQ L+GE DF+SFRA  CQ+ +P + ++ + V   
Sbjct: 123 LLEDKAGYVMLPPGQSLDVAAMNEAAQVLVGEHDFSSFRAAECQAKSPVKTMYSIEVRGE 182

Query: 178 GMYIVVDIQANAFLHHMVRNIVGSLLEIGLGNQPLDWMATLLEAKDRSQAAATAKPHGLY 237
           G ++ V I+ +AFLHHMVRNI+G L+ IG G QP+ WM  +L A+ R  AA T  P GLY
Sbjct: 183 GEWVFVRIRGSAFLHHMVRNIMGCLVAIGRGRQPVSWMGDVLAARSRVAAAPTFMPDGLY 242

Query: 238 LVDVTYPESFGLP 250
           L +V YP++F LP
Sbjct: 243 LAEVGYPDAFSLP 255