Pairwise Alignments

Query, 505 a.a., MATE efflux family protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 444 a.a., putative multi antimicrobial extrusion protein from Phaeobacter inhibens DSM 17395

 Score =  197 bits (500), Expect = 8e-55
 Identities = 142/436 (32%), Positives = 213/436 (48%), Gaps = 10/436 (2%)

Query: 1   MTQAKFVEGPILRHILVMSSTAAVGISALFLVDLLDIFFLSLLGEAELAAAVGYAGTISF 60
           M Q    +G + R +  +S+  ++GI  +  V L D +FL  LGEA LAA VG+   ++ 
Sbjct: 1   MAQKNLTQGAVWRALAAVSAPMSLGILGVLSVGLADAYFLGQLGEAPLAA-VGFIYPVTT 59

Query: 61  FTTSIGIGLSIALGAQVSRAIGAREID-NAKRLLMSSLLVTLAVSSLVSLLVSLNIPALL 119
             TS+ IGLS    A +S+++G  +      RL + ++++   V++LV+L+  L   AL 
Sbjct: 60  AVTSLSIGLSAGANAAISQSLGRGDSAIETNRLSVHAIVLGTLVATLVALVFYLGAGALF 119

Query: 120 TLVGATGQTAELAADYLYILVPSLPFICLAMALGAALRAVGDAKLSMVSTLVGGGVNLVL 179
           +++GA       A  Y      S PF+     L A  RA GD   S V  +V   +N+ L
Sbjct: 120 SVMGAKDDVLAEAQSYAPFWALSFPFLVGMALLNAVFRAHGDGATSAVIMMVAAALNIAL 179

Query: 180 DPILIFVLA----MGIEGAAVASVLARLSVMLVAGRGVFVKHGLGSKPT--RDAFVGDLK 233
           DP+LI+ L     M   GAA+A+ LAR+ + L+   G  ++ G+   P    D   G ++
Sbjct: 180 DPVLIYGLGPVPEMSTAGAALATALARV-LTLIGAFGYALRTGVIRPPEVFTDGIGGSVR 238

Query: 234 PIFAIAGPAMITNVATPIGNGFMTRAIAEFGDAYVAGWAVLGRLTPVAFGMIFALSGAIG 293
            +  +  PA  +N   P G   +T A A  GD  VAG     R+  VA   + ALS  IG
Sbjct: 239 EVIRVGLPAAFSNAINPAGMAMVTAAAATLGDTVVAGLGAAQRVQSVALVPLLALSAGIG 298

Query: 294 PIVGQNFGARRYDRLRDCLTQSLLFCTVYVVGMALVLFLAQDLIVSAFDLKGDSAEFIGF 353
           P+VGQN+GA +  R R  + QS  FC  Y + MALVL L    I         +A     
Sbjct: 299 PVVGQNWGADQQMRARLAVWQSWQFCIGYGLAMALVLTLFASDIAGLLTSDQGAAATTAQ 358

Query: 354 FLTYIAVFFVFSGALFVANASFNNLGKAKYSTVFNVGKATLGTLPFIWLGAQYGGVYGVL 413
           +L  ++  F+  G L  ANA+ N   KA +S   ++ +     +P  WLG    G  G+L
Sbjct: 359 YLRIVSWSFLGYGVLVTANAAMNARSKAVWSMGLSLMRIFAIYVPLAWLGVWIFGYAGIL 418

Query: 414 IGQVLGSVLFGVAGVY 429
              V+ + L  V G Y
Sbjct: 419 GAAVIAN-LAAVPGAY 433