Pairwise Alignments

Query, 505 a.a., MATE efflux family protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 448 a.a., MATE efflux family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 72.0 bits (175), Expect = 4e-17
 Identities = 93/392 (23%), Positives = 169/392 (43%), Gaps = 26/392 (6%)

Query: 37  IFFLSLLGEAELAAAVGYAGTISFFTTSIGIGLSIALGAQVSRAIGAREIDNAKRLLMSS 96
           IF    LGE  LA  +  A  +     +IG  + +   A VS  +G   +  A++LL ++
Sbjct: 45  IFVGHYLGETGLAGMM-LAYPVGAILYAIGAMIGMGSAALVSINLGQGNVAKARKLLGNA 103

Query: 97  LLVTLAVSSLVSLLVSLNIPALLTLVGATGQTAELAADYLYILVPSLPFICLAMALGAAL 156
             + L   +  +L+  +    +L  +GA G+  E A +YL+       F  ++MA    L
Sbjct: 104 FSLCLLAGAFFALVGGVFSRDILIALGAEGEILENANEYLFWYFALCHFPIISMAFTTLL 163

Query: 157 RAVGDAKLSMVSTLVGGGVNLVLDPILIFVLAMGIEGAAVASVLARLSVMLVAGRGVFVK 216
           R  G   +     ++GG +N  LD + I V   G+ GAA+A++L++    L+      ++
Sbjct: 164 RNDGRPSMVTFVLILGGVLNTFLDWLFIVVFPFGLAGAAIATMLSQAVTGLLC-----LQ 218

Query: 217 HGLGSKPTRDAFVGDLK-------PIFAIAGPAMITNVATPIGNGFMTRAIAEF-GDAYV 268
           H  G++      +  +K        I  +  P+ + N+   I       A     G  +V
Sbjct: 219 HFFGARTQLKINLEQMKLKLDNCINIARVGLPSFLMNLYLSIVLTLHNTAFLWVGGPLHV 278

Query: 269 AGWAVLGRLTPVAFGMIF-ALSGAIGPIVGQNFGARRYDRLRDCLTQSLLF-CTVYVVGM 326
           A + V+   T   F +IF  ++    PI   N GA R+DR++    +++ F  T+    +
Sbjct: 279 AAYGVVS-YTEAFFYLIFEGIALGTQPIYSFNAGAGRFDRVKQ--ARNIAFSMTLLTAAL 335

Query: 327 ALVLFLAQ-DLIVSAFDLKGDSAEFIGFFLTYIAVFF---VFSGALFVANASFNNLGKAK 382
            LVL  ++ + +V  F   GD+       +  +  +F      G + V  + F  +  +K
Sbjct: 336 GLVLIYSRPEWLVYLF--AGDNPSLTPVAIEGMRWYFWGLPMEGLILVGASFFQAINCSK 393

Query: 383 YSTVFNVGKATLGTLPFIWLGAQYGGVYGVLI 414
            +++    K  L     I+  A   GV GV +
Sbjct: 394 QASILTGAKLIL-IAAIIYCFAWAFGVIGVWV 424