Pairwise Alignments

Query, 505 a.a., MATE efflux family protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 452 a.a., MATE efflux family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  170 bits (430), Expect = 1e-46
 Identities = 119/434 (27%), Positives = 205/434 (47%), Gaps = 7/434 (1%)

Query: 7   VEGPILRHILVMSSTAAVGISALFLVDLLDIFFLSLLGEAELAAAVGYAGTISFFTTSIG 66
           +  PI R +L MS    +GI  +    L D FF+S LG  E  AA+ +   ++   +SI 
Sbjct: 8   LSAPIGRVLLNMSLPNLIGIMTILGFSLADTFFISQLG-TEALAAISFTFPVTLIISSIA 66

Query: 67  IGLSIALGAQVSRAIGAREIDNAKRLLMSSLLVTLAVSSLVSLLVSLNIPALLTLVGATG 126
           IG+   +   + R IG+     AK  L  +LL+T  + + +S L S+ I  L +L+GA  
Sbjct: 67  IGVGAGVSTNLGRLIGSGNAPQAKVFLHDALLLTFILIASLSALGSIFIEPLFSLLGANE 126

Query: 127 QTAELAADYLYILVPSLPFICLAMALGAALRAVGDAKLSMVSTLVGGGVNLVLDPILIFV 186
            +  L  DY+       P + L M     LR+ GD +   +   +   +NL+LDP+LIF 
Sbjct: 127 TSLPLIHDYMMYWYVGAPLLVLLMVGNQGLRSTGDTRSPAMIMTLAAIINLILDPLLIFG 186

Query: 187 LA----MGIEGAAVASVLARLSVMLVAGRGVFVKHGLGSKPTRDA--FVGDLKPIFAIAG 240
           +     + I+GAA+A++ + L  + ++G  + +KH +  +   D      +   +  IA 
Sbjct: 187 IGPFPRLEIQGAAIATLFSWLVALSLSGYLLIIKHRMLERAAFDIDRMRANWSKLAHIAQ 246

Query: 241 PAMITNVATPIGNGFMTRAIAEFGDAYVAGWAVLGRLTPVAFGMIFALSGAIGPIVGQNF 300
           PA + N+  P+ N  +   +A    + VA +    RL  V   ++ ALS ++ P + QN 
Sbjct: 247 PAALMNLINPLANAVIMAMLAHIDHSAVAAFGAGTRLESVLLIVVMALSSSLMPFIAQNL 306

Query: 301 GARRYDRLRDCLTQSLLFCTVYVVGMALVLFLAQDLIVSAFDLKGDSAEFIGFFLTYIAV 360
           GA +  R +  L  SL F  V+   + + L      + S F       E++ F++  +  
Sbjct: 307 GAGQPQRAKQALLLSLKFILVFQTLLYIPLAFFAQPLASLFSTDPQVLEWLSFYILVLPC 366

Query: 361 FFVFSGALFVANASFNNLGKAKYSTVFNVGKATLGTLPFIWLGAQYGGVYGVLIGQVLGS 420
            +   G + +   + N   +   S V N+ +  L  LP   LG+   GV G+L+   + +
Sbjct: 367 AYGPLGIVIIFATALNAYHRPMSSLVINLCRLVLLMLPLAALGSYIDGVKGLLLALPITN 426

Query: 421 VLFGVAGVYTAYRL 434
           +L G+A  Y A R+
Sbjct: 427 LLMGIACYYLAQRI 440