Pairwise Alignments

Query, 505 a.a., MATE efflux family protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 469 a.a., multi antimicrobial extrusion protein MatE (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  166 bits (419), Expect = 2e-45
 Identities = 127/425 (29%), Positives = 199/425 (46%), Gaps = 17/425 (4%)

Query: 18  MSSTAAVGISALFLVDLLDIFFLSLLGEAELAAAVGYAGTISFFTTSIGIGLSIALGAQV 77
           +S+  ++GI  + +V L D FFL+ +GE ELAA VG+   +    ++  IG+S      +
Sbjct: 20  VSAPMSLGILGVLMVGLADAFFLARVGEVELAA-VGFVYPVIVAVSAFSIGMSAGANTVL 78

Query: 78  SRAIGAREIDNAKRLLMSSLLVTLAVSSLVSLLVS----LNIPALLTLVGATGQTAELAA 133
           S+AIG  E  N+   L    L  +   +L+ L V     L  P L T +GA G+      
Sbjct: 79  SQAIGRTESGNS---LSCRALHAVGFGALIGLGVGSALWLVAPVLFTALGARGEVHAAIL 135

Query: 134 DYLYILVPSLPFICLAMALGAALRAVGDAKLSMVSTLVGGGVNLVLDPILIF----VLAM 189
            YL     S P + + M L AA RA GD        +    VN+ + P+L+F    +  +
Sbjct: 136 AYLPWWAASFPILVVTMILNAAFRAGGDGLTPSALMVATAVVNIAMTPLLVFGIGTIEGL 195

Query: 190 GIEGAAVASVLARLSVMLVAGRGVFVKHG---LGSKPTRDAFVGDLKPIFAIAGPAMITN 246
           G+ GA +A++ AR+ V ++A  G+ V+ G    G+   R  F   ++ I AI  PA  + 
Sbjct: 196 GMAGAGIATLAARMLVGVLA-LGIAVRRGTIAFGAHTAR-GFTRSVRDIAAIGLPAAASR 253

Query: 247 VATPIGNGFMTRAIAEFGDAYVAGWAVLGRLTPVAFGMIFALSGAIGPIVGQNFGARRYD 306
              P G   +T A A  GDA VAG+    R+  +     FALS  + PI+GQ +GA    
Sbjct: 254 AVNPAGMALVTAAAATLGDAAVAGFGAAARVQALCLVPFFALSTGLAPIIGQAWGADMQG 313

Query: 307 RLRDCLTQSLLFCTVYVVGMALVLFLAQDLIVSAFDLKGDSAEFIGFFLTYIAVFFVFSG 366
           R R  L  S  F   Y +  A+VL++  D I       G +A +   +LT +       G
Sbjct: 314 RARHALRLSAGFALGYGLCAAIVLWILADPIAQLMTDDGTAASYTAQYLTIVGWSLGGYG 373

Query: 367 ALFVANASFNNLGKAKYSTVFNVGKATLGTLPFIWLGAQYGGVYGVLIGQVLGSVLFGVA 426
            +   NA+     K  ++   ++ +  +  +P  WLGA   G  G+L+  V  +V+    
Sbjct: 374 LVVTVNAALTARSKPGWALGLSLTRIGVIYVPLAWLGALTLGFTGILLAAVAANVIAAWL 433

Query: 427 GVYTA 431
           G+  A
Sbjct: 434 GMVFA 438