Pairwise Alignments

Query, 296 a.a., Cytidine deaminase (EC 3.5.4.5) (from data) from Shewanella amazonensis SB2B

Subject, 296 a.a., cytidine deaminase from Pantoea sp. MT58

 Score =  241 bits (616), Expect = 1e-68
 Identities = 141/289 (48%), Positives = 172/289 (59%), Gaps = 2/289 (0%)

Query: 1   MQDRFVRRINELPKALADELLPMLGE-QFCGHLDAQQVKQLCAVSAMDSHELGLALLPIA 59
           MQ RF+     LP  L   L P+L E  F   L A QV  L   + MD+  L LALLP+A
Sbjct: 1   MQSRFLSAFEALPSTLQTALAPLLNEADFNAVLSADQVASLQQQTQMDADALALALLPLA 60

Query: 60  AALAKPPVSNFYVGAIAVGSGGDFYMGANLELQGEALFHSVHAEQSAISHAWLSGETQIS 119
           A+ A   VS+F VGAIA G  G++Y GAN+E  G A+  +VHAEQSAI+HAWL GE Q+ 
Sbjct: 61  ASCAVATVSHFNVGAIARGVSGNWYFGANMEFVGTAMQQTVHAEQSAITHAWLRGERQLE 120

Query: 120 DIIVNASPCGHCRQFMNELVQGQAIRIHLPGQDTAPLSHYLPYAFGPADLNVTAPLLSKQ 179
            I VN +PCGHCRQFMNEL  G +IRI LP +  + L+ YLP AFGP DL++T  L+ + 
Sbjct: 121 TITVNYTPCGHCRQFMNELNSGTSIRISLPKRAISTLADYLPDAFGPRDLDITTFLMDEV 180

Query: 180 QTELVLESDDPLLIEALDHAGLSYAPYSQCHAAVVLETEDGASFCGRYAENAAFNPSMLP 239
               V   D+ L+  A+  A  S+APYSQ HA V L T+DGA   GRYAENAAFNPS  P
Sbjct: 181 DHGYVAVGDE-LVQAAVAAANASHAPYSQSHAGVALLTQDGAIVAGRYAENAAFNPSFPP 239

Query: 240 MQMALSALVRHNRSFSDIKRAVLLESSQGKISLVGATMDALHAVAVVEL 288
           +Q AL  L         IK+AVL E     +S   AT   L      EL
Sbjct: 240 LQAALVLLNMQGGDVHQIKKAVLAEVENATLSQFAATQATLETFGCGEL 288