Pairwise Alignments

Query, 289 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 166 a.a., ATP-dependent zinc protease from Pseudomonas sp. BP01

 Score = 50.1 bits (118), Expect = 3e-11
 Identities = 47/163 (28%), Positives = 72/163 (44%), Gaps = 17/163 (10%)

Query: 8   ISLLLLSCAAFAKSTVGQSVEIHQPASGLSFIARVDTGASISSIHAVDIEVLGGEAESMK 67
           +SLL L   A   +  G+   I  P  G +  A++DTGA  +S+ A DIE+   + +   
Sbjct: 8   LSLLALPVMAAEPTIYGRYENIALPELGETLKAKMDTGAFTASLSAKDIELFSRDGDEW- 66

Query: 68  DNIGKRVKFTTEGLGGVTKAIEAKIVKVTTVSNSQGTE---------SRYTVELELQYEK 118
                R +  T+   G  K  E K+ +++ +      E          R  V+LEL    
Sbjct: 67  ----VRFRLATKDSDG--KVYEHKVSRISKIKGRADEEEEGDAPEISKRPVVDLELCLGD 120

Query: 119 DVRNIRVNLRDRGHMDYKLLLGRNWL-EGHYMVDVAEKNVIGE 160
             R + VNL DR   +Y LL+G   L E    V+ A+K   G+
Sbjct: 121 VKRTVEVNLVDRSSFNYPLLVGSKALREFKAAVNPAKKFTAGK 163



 Score = 37.7 bits (86), Expect = 2e-07
 Identities = 36/140 (25%), Positives = 58/140 (41%), Gaps = 16/140 (11%)

Query: 150 VDVAEKNVIGERAPIHLLEGDITFDTRIDTGAVENSLHATDIQIENEHPSDMEANVGKPI 209
           V  AE  + G    I L E   T   ++DTGA   SL A DI++ +    +        +
Sbjct: 15  VMAAEPTIYGRYENIALPELGETLKAKMDTGAFTASLSAKDIELFSRDGDEW-------V 67

Query: 210 SFTTVNEKGEKRRIHSRITETSLIRNAQGSE---------VRYMVELTLGEPGKEFKVKV 260
            F    +  + +    +++  S I+     E          R +V+L L     +  V+V
Sbjct: 68  RFRLATKDSDGKVYEHKVSRISKIKGRADEEEEGDAPEISKRPVVDLELCLGDVKRTVEV 127

Query: 261 NLRDRSEMTHKLLIGRNWLQ 280
           NL DRS   + LL+G   L+
Sbjct: 128 NLVDRSSFNYPLLVGSKALR 147