Pairwise Alignments

Query, 795 a.a., phenylalanyl-tRNA synthetase subunit beta (RefSeq) from Shewanella amazonensis SB2B

Subject, 820 a.a., phenylalanyl-tRNA synthetase beta chain (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  396 bits (1017), Expect = e-114
 Identities = 277/832 (33%), Positives = 441/832 (53%), Gaps = 50/832 (6%)

Query: 1   MKFSESWLREWVNPAISREDLSHQITMAGLEVDGVDAVAA---GFSGVFVGEVVECGQHP 57
           M  S +WL+E+VN  ++ ++ +  +T  GLE  GV+ V     G  G+ +GEV+ C +HP
Sbjct: 1   MNISYNWLKEYVNFDLTPDETAAALTSIGLETGGVEEVQTIKGGLEGLVIGEVLTCEEHP 60

Query: 58  DADKLRVTKVNVGGDTLLDIVCGAPNCRLGLKVAVATVGAVL-PGD--FKIKKAKLRGQP 114
           ++D L +T VN+G    + IVCGAPN   G KV VAT+G  L  GD  F IKK+K+RG  
Sbjct: 61  NSDHLHITTVNLGDGEPVQIVCGAPNVAAGQKVVVATLGTKLYDGDECFTIKKSKIRGVE 120

Query: 115 SEGMLCSYSELGIDIESDGIIELPLDAPIGTDIREYLDL-NDAVIDVDLTSNRADCLGMA 173
           S GM+C+  E+GI  +  GII LP +A  GT  ++Y ++ +D V++VD+T NRAD     
Sbjct: 121 STGMICAEDEIGIGTDHAGIIVLPAEAVPGTLAKDYYNIKSDYVLEVDITPNRADACSHY 180

Query: 174 GLAREVGVL-----NRAEVIEPSWTPAVATIGDA-IDIQLSAPAACPRYLGRIVRNVNVK 227
           G+AR++         +A +  PS         D  I++ +    ACP Y G  V+ V VK
Sbjct: 181 GVARDLYAYLIQNGKQATLQRPSVDGFKVENHDLDIEVVVENSEACPHYAGVTVKGVTVK 240

Query: 228 APTPEWMKEKLRRSGIRSIDPIVDITNYVLIEFGQPMHAFDLAKIDGK--IEVRLGKGDE 285
             +PEW++ KLR  G+R I+ +VDITNY++  FGQP+H FD  KI G   I   L +G  
Sbjct: 241 E-SPEWLQNKLRLIGVRPINNVVDITNYIVHAFGQPLHCFDAGKIKGNEVIVKTLPEGTP 299

Query: 286 KLTLLDGSEITVPNDTLVIADNSKPLALAGVFGGEFSGVGESTQDILLECAFFAPLAIMG 345
            +TL D  E  +    L+I +  + + +AGVFGG  SG  E+T D+ +E A+F P  +  
Sbjct: 300 FVTL-DEVERKLSERDLMICNKEEAMCIAGVFGGLDSGSTEATTDVFIESAYFHPTWVRK 358

Query: 346 KARKLGLHTDSSHRFERGVDPELQHKVMDRATRLVLDICGGEAGTVVEAKSDEHLPKARE 405
            AR+ GL+TD+S RFERG+DP      +  A  +V ++ GG   + ++      +P+   
Sbjct: 359 TARRHGLNTDASFRFERGIDPNGVIYCLKLAALMVKELAGGTISSEIKDVCVA-VPQDFM 417

Query: 406 ILLRRSKLDKILGHHVPDSDVVEILTRLGFAVTAGEGEWQVTTAT--YRFDMAIEEDLIE 463
           + L   K++ ++G  +P   +  I+T L   +   E    +T A   YR D+  + D+IE
Sbjct: 418 VELSYEKVNSLIGKVIPVETIKSIVTSLEMKIM-NETVDGLTLAVPPYRVDVQRDCDVIE 476

Query: 464 EVARIYGYNN--IPNKAPMAHLRMSTHQEADISLKKVRSLLVARGFQEAVTYSFVDPKLQ 521
           ++ RIYGYNN  IP     +      H +++     V   LV  GF E +  S       
Sbjct: 477 DILRIYGYNNVEIPTTLNSSLTTKGEHDKSNKLQNLVAEQLVGCGFNEILNNSLTRAAYY 536

Query: 522 QLV--HPGEQAMILPNPISSEMSAMRLSMFTGLLTAVGYNQARQQGRVRLFETGLRFVPD 579
             +  +     ++L NP+S++++ MR ++  G L ++ +N  R+   ++ FE G  +  D
Sbjct: 537 DGLENYSSNHLVMLLNPLSADLNCMRQTLLFGGLESIAHNANRKNADLKFFEFGNCYYFD 596

Query: 580 ANAESGVR------QQPMLGAVIAGLQNEEHWSMESKTVDFFDLKGDLEAII---GLT-- 628
           A+ ++  +      +   LG  + G +    W+   +    ++LK  +E I+   GL   
Sbjct: 597 ADKKNPEKVLATYSEDYHLGLWVTGKKVANSWAHPDENSSVYELKAYVENILKRLGLDLH 656

Query: 629 --VSGSEFSFRRATHSALHPGQCAEILRNDRVIGYIGAVHPSLEKPFGLNGKTIVFELEL 686
             V G+      AT  ++H        +  + +   G V   L K F ++ +    +L  
Sbjct: 657 NLVVGNLTDDIFATALSVHT-------KGGKRLASFGVVTKKLLKAFDIDNEVYYADLNW 709

Query: 687 DALLHA----KLPEAQVISKFPANRRDIALVVDESVAAADVIKVIRKVGENQLVGVNLFD 742
             L+ A    K+   + ISKFPA +RD+AL++D++V  A++ K+     +  L  V LFD
Sbjct: 710 KELMKAIRSVKISYKE-ISKFPAVKRDLALLLDKNVQFAEIEKIAYDTEKKLLKEVELFD 768

Query: 743 VYQGKGVEPGKKSLAIALTLQDNTRTLEEKEIAEAVDTVVSALKSEFNASLR 794
           VY+GK +E GKKS A++  LQD T+TL +K I + +  +V  L+ + NA LR
Sbjct: 769 VYEGKNIEAGKKSYAVSFLLQDETQTLNDKMIDKIMSKLVKNLEDKLNAKLR 820