Pairwise Alignments

Query, 245 a.a., 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (RefSeq) from Shewanella amazonensis SB2B

Subject, 249 a.a., 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) from Pedobacter sp. GW460-11-11-14-LB5

 Score =  138 bits (348), Expect = 9e-38
 Identities = 79/232 (34%), Positives = 131/232 (56%), Gaps = 11/232 (4%)

Query: 2   IIPAIDLIDGQVVRLFQGDYAKKTEFSLDPKNQLLSYQQDGAALLHLVDLTGAKDPDKRQ 61
           IIPAID++DG+VVRL +GDY +KTE+++     +  Y+ +G   +H++DL GAK  D   
Sbjct: 3   IIPAIDILDGKVVRLREGDYNQKTEYAVSIPEMIEKYRSNGTDFIHIIDLNGAKG-DFSN 61

Query: 62  TKLIEEIAASLSTPLQVGGGIRSAADVDALLNAGVARVVIGSLAVKSPEVVLRLFDKYG- 120
            K + EI       +Q GGGIR+   V  LL+AG+ RV++G+ A+ +P+ + +L + +  
Sbjct: 62  QKTLFEIIKKTEMKVQYGGGIRTIEQVTNLLDAGIHRVIVGTQAITNPDFLPQLSEAFAK 121

Query: 121 ----GDAICLALDVNIDADGNKMVAVHGWQQGGGKSLESLVDTFMPAGLKHALVTDISRD 176
                + I +A+DV      ++++   GW +     L   VD  +  G    L TDIS+D
Sbjct: 122 KDDYANRIVIAIDVL-----DEVIKYSGWMESSPIKLMDYVDKCLSLGFFRFLCTDISKD 176

Query: 177 GTMTGANTALYCELAERFNEVQWQASGGVATLDDVKAVKTSGASGIIIGKAL 228
           G + GA   LY +L E    ++  ASGGV+++ D+  +       +++GKA+
Sbjct: 177 GKLGGAAIDLYEKLLEHSPMIKLIASGGVSSMQDIYDLAKYPIRSVVVGKAI 228



 Score = 24.6 bits (52), Expect = 0.002
 Identities = 10/35 (28%), Positives = 20/35 (57%)

Query: 196 EVQWQASGGVATLDDVKAVKTSGASGIIIGKALLT 230
           E++ Q  GG+ T++ V  +  +G   +I+G   +T
Sbjct: 73  EMKVQYGGGIRTIEQVTNLLDAGIHRVIVGTQAIT 107