Pairwise Alignments

Query, 665 a.a., ATP-dependent helicase DinG (RefSeq) from Shewanella amazonensis SB2B

Subject, 714 a.a., Rad3-related DNA helicases from Pseudomonas stutzeri RCH2

 Score =  211 bits (538), Expect = 7e-59
 Identities = 212/734 (28%), Positives = 319/734 (43%), Gaps = 139/734 (18%)

Query: 22  GLLSRFI--RGYRRREVQQQMAEEVASCL------------SHTHKLVLEAGTGVGKTFA 67
           G  +RF+  +G + R  Q+ M  EVA  L            S    + +EAGTG GKT A
Sbjct: 12  GAYTRFLEAKGLKARYGQRLMIAEVAKVLGTIKTDAEGRRESEPAVVAVEAGTGTGKTVA 71

Query: 68  YLVPAL----LSGKQVIVSTGSKNLQEQLFYKDLPALLEMLKLHLPVSILKGRSNYLCQR 123
           Y + A+     +GK+++++T +  LQEQ+ +KDLP L+    L+   ++ KGR  YLC  
Sbjct: 72  YSLAAIPTAKAAGKRLVIATATVALQEQIVHKDLPDLMRNSGLNFSFALAKGRGRYLCLS 131

Query: 124 -----LMAAQMEAAFSH--------------DEKLLDDLLKLNQFAQTTEDGDLGNLTGV 164
                L   Q ++A +                +KL   +++  + A    DGD  +    
Sbjct: 132 KLDLLLQEGQAQSATAQLFEEEGFRIEVDERSQKLFTSMIE--KLAGNRWDGDRDSWPEE 189

Query: 165 AEDARAISLVASTQDSCTGQRCAFYEDCFTRKARARAMNARLIVVNHHLFFADRVLKDTG 224
             D+   S + +    CTG+ C  ++ C   KAR       +IV NH +  AD  L   G
Sbjct: 190 LGDSDW-SQLTTDHSQCTGRHCPNFQQCAFYKAREGMTKVDVIVTNHDMVLADLAL---G 245

Query: 225 FAELLPDVDAVI--FDEAHLLPDIAMQYFG------------AQLST------------G 258
              +LPD    I  FDE H LPD A+ +F              Q+              G
Sbjct: 246 GGAVLPDPRETIYVFDEGHHLPDKAIGHFAHFTRLRSTADWLGQVEKNLTKLLAQHPLPG 305

Query: 259 SLRRLLDGI------------------ERLTEGELGDTQGLKLLPQRARIKLDAWQNCLL 300
            L RL++GI                  E+L + + G+    +  P R R         L+
Sbjct: 306 ELGRLVEGIPELARELRTQQQFMFSACEQLADFKAGEDMEGRERP-RHRFVGGVVPEHLV 364

Query: 301 DAGS-------------SDFRQLLKDKTAALAAGELIAELSALE------ALLLANVGRS 341
           + G+             +   +LLK+       G  IA   A E      +LL  + G  
Sbjct: 365 ELGTELKKGFAKLTDLFTRIAELLKEDMDG-ETGSGIASHQAEEWYPLFGSLLTRSQGNW 423

Query: 342 EPLDDFAVKLPELKQKLERFIACDDPGSAYSIDIGERHLMLRISPIDIAKACSE-LFSED 400
           E    F V+ PE    + R++   + G+ + I++         SPI  A+     L++  
Sbjct: 424 ELWTAFTVEDPEDSPPMARWLTLAEGGALFDIEVNA-------SPILAAETLRRNLWNVA 476

Query: 401 TAWVFTSATLQVERSLQFFTRELGLTSAKPVSAKRSQSGAGAKSAVCKEVLLDSPFDYPR 460
              + TSATL    S   +    GL               GA +AV     + SPF +  
Sbjct: 477 FGALVTSATLTALNSFDRYRMRAGLPK-------------GAVTAV-----VPSPFHHAD 518

Query: 461 QSLLCVPRRLGSVANQDAMVCQLTEVCLKLIRAAKGRTFILFTSHRMMEAVARSLVGRCH 520
             +L VP       +  A    +      L+  A+G T +LF+S + M+ V   L     
Sbjct: 519 AGVLRVPDLKADPRDAAAHTAAIVRELPALVEGARG-TLVLFSSRKQMQDVFDGLERDWR 577

Query: 521 YPLLVQGQGGKQQLLSKFRQL---GEA-VLLGTGSFWEGVDVRGKLLSCVIIDKLPFASP 576
             +L+QG   KQ+ L+K +     GE+ VL G  SF EGVD+ G     V+I K+PFA P
Sbjct: 578 RRVLIQGNLSKQETLNKHKARVDDGESSVLFGLASFAEGVDLPGAYCEHVVIAKIPFAVP 637

Query: 577 DDSLYKARASRVEARGGDPFLEISLPQAVIALKQGAGRLIRDETDRGVLVICDNRLVNRP 636
           DD +  A A  + ARGG+PF+EI++P A + L Q  GRL+R ETDRG + + D R+V + 
Sbjct: 638 DDPVEAALAEWIGARGGNPFMEIAVPDASLRLVQACGRLLRTETDRGTITLLDRRVVTQR 697

Query: 637 YGQAFLQSLPPMAR 650
           YG+A L +LPP  R
Sbjct: 698 YGKAILNALPPFRR 711