Pairwise Alignments

Query, 665 a.a., ATP-dependent helicase DinG (RefSeq) from Shewanella amazonensis SB2B

Subject, 711 a.a., ATP-dependent helicase DinG/Rad3 from Xanthomonas campestris pv. campestris strain 8004

 Score =  197 bits (500), Expect = 2e-54
 Identities = 213/700 (30%), Positives = 320/700 (45%), Gaps = 112/700 (16%)

Query: 30  GYRRREVQQQMAEEVASCLSHTHKL-VLEAGTGVGKTFAYL---VP-ALLSGKQVIVSTG 84
           G+  R  Q QM   V+  L+ +  + V EA TGVGK+  YL   VP AL + K++++STG
Sbjct: 41  GFATRRAQSQMIGLVSRALATSGGIGVAEAPTGVGKSLGYLTAGVPIALATKKKLVISTG 100

Query: 85  SKNLQEQLFYKDLPALLEMLKLHLPVSILKGRSNYLCQRLMAAQMEAAFSH-----DEKL 139
           +  LQ QL  +D+PA L+   L   V++ KGR+ YLC R  AA++E   S      DE++
Sbjct: 101 TVALQSQLVERDIPAFLKATGLEATVALAKGRTRYLCTR-NAAELEGETSQNGMFEDEQV 159

Query: 140 LDD---------LLK--LNQFAQTTEDGDLGNLTGVAEDARAISL---VASTQDSCTGQR 185
           L D         L K     +A  T +GDL +    A +  ++ L   V +    C G+R
Sbjct: 160 LYDRPLSPADVDLAKRLAKAYAARTWNGDLDD----APEPVSVPLRMRVTTPASGCAGRR 215

Query: 186 CAFYEDCFTRKARARAMNARLIVVNHHLFFADRVLKDTGFAELL---PDVDAVIFDEAHL 242
           C++   C   KAR     A+++V NH L  +   L D    + L   P    ++ DE H 
Sbjct: 216 CSYAAQCPVLKARTDVREAQIVVTNHALLLSSLSLGDAENGQPLIAPPSDMLLVLDEGHH 275

Query: 243 LPDIAMQYFGAQLS-------TGSLRRLLDGIERLTEGE-LGDTQGLKLLPQRARIKLDA 294
           +  +A+    A L        TG ++ L+    R  + + +G+     LLP  A I++ A
Sbjct: 276 IAGVAIDQGAANLPLDDMAKRTGRMQILIAAAYRAVDKDKIGN-----LLPSEA-IEVAA 329

Query: 295 WQNCLLDAGSSDFRQLLKDKTAAL-----------------AAGELIAELSALEALLLAN 337
             + LL A  ++  ++ K +                     A  EL  E  AL   + A 
Sbjct: 330 RVSKLLKAFHTEVERVWKPEPGERDPLWRAPNGKLPPQWGPAIEELGEETRALFNWVHAA 389

Query: 338 VG-------------RSEPLDDFAVKLPELKQKLERFIACDD----PGSAYSIDIG-ERH 379
            G             R +     A+++ E +  L      +D    P  A  I +  +  
Sbjct: 390 HGTVAKGKQDDAARERLQRSLGMALEMAEQQHNLWSGWRREDKDGQPPMARWITLSRDGD 449

Query: 380 LMLRISPIDIAKACSEL-FSEDTAWVFTSATLQVERSLQFFTRELGLTSAKPVSAKRSQS 438
           L+   SP+  A+    L ++E  + V TSATL      Q F  + GL     +++     
Sbjct: 450 LICHCSPVSAAQVLRTLLWNEVDSVVMTSATLTGGGDFQSFAIDNGLPDHAEMAS----- 504

Query: 439 GAGAKSAVCKEVLLDSPFDYPRQSLLCVPRRLGSVANQDAMVCQLTEVCLKLIR----AA 494
                        L SPFD P Q+ L VP         D       EV   L+R    AA
Sbjct: 505 -------------LASPFDLPNQAELIVPN---FPVTPDDREGHPKEVAKYLVRELDWAA 548

Query: 495 KGRTFILFTSHRMMEAVARSLVGRCHYPLLVQGQGGKQQLLSKFRQ---LGE-AVLLGTG 550
           KG + +LFTS   ME VA  L       +LVQG+G K QL+++  +    GE +VL G  
Sbjct: 549 KG-SIVLFTSRWKMEKVADLLPLAQRNRVLVQGEGNKSQLITEHLRRIAAGEGSVLFGLN 607

Query: 551 SFWEGVDVRGKLLSCVIIDKLPFASPDDSLYKARASRVEARGGDPFLEISLPQAVIALKQ 610
           SF EG+D+ G+  + V+I ++PFA P D      +  +E+RG + F  I++P A+  L Q
Sbjct: 608 SFGEGLDLPGEACTTVVITQVPFAVPTDPQTSTLSEWLESRGHNAFNLIAIPHALRTLTQ 667

Query: 611 GAGRLIRDETDRGVLVICDNRLVNRPYGQAFLQSLPPMAR 650
            AGRLIR   D G ++I D+RL+ R YG+  L +LPP  R
Sbjct: 668 FAGRLIRSSNDHGRVIILDSRLLTRRYGKRILDALPPFKR 707