Pairwise Alignments

Query, 665 a.a., ATP-dependent helicase DinG (RefSeq) from Shewanella amazonensis SB2B

Subject, 633 a.a., ATP-dependent helicase, DinG family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  770 bits (1989), Expect = 0.0
 Identities = 393/647 (60%), Positives = 489/647 (75%), Gaps = 19/647 (2%)

Query: 18  FDEGGLLSRFIRGYRRREVQQQMAEEVASCLSHTHKLVLEAGTGVGKTFAYLVPALLSGK 77
           F   G+L++ I+G+  R+ Q QMA+ +++ ++     V+EAGTGVGKTFAYL+PA+LSGK
Sbjct: 5   FASDGVLAKHIQGFSARQSQVQMAQIISNAIASKGNAVIEAGTGVGKTFAYLIPAMLSGK 64

Query: 78  QVIVSTGSKNLQEQLFYKDLPALLEMLKLHLPVSILKGRSNYLCQRLMAAQMEAAFSHDE 137
           QVIVSTGSKNLQEQLF KDLPAL  ML +   +++LKGR+NYLCQ  +  QM+ A   + 
Sbjct: 65  QVIVSTGSKNLQEQLFLKDLPALTAMLGIAPKLALLKGRNNYLCQYRLDRQMQEASHIEA 124

Query: 138 KLLDDLLKLNQFAQTTEDGDLGNLTGVAEDARAISLVASTQDSCTGQRCAFYEDCFTRKA 197
           +LLDDLLK+NQ+A  ++DGD+G LT VAE++ A+ LV ST+++C GQRC FY+ CFTRKA
Sbjct: 125 RLLDDLLKINQWAGMSKDGDIGGLTSVAENSPALPLVVSTKETCLGQRCEFYDACFTRKA 184

Query: 198 RARAMNARLIVVNHHLFFADRVLKDTGFAELLPDVDAVIFDEAHLLPDIAMQYFGAQLST 257
           R+RAM+A++IVVNHHLFFAD VLKDTGFAELLPD D VIFDEAHLLPDI + YFG Q S+
Sbjct: 185 RSRAMDAKIIVVNHHLFFADSVLKDTGFAELLPDPDVVIFDEAHLLPDICVSYFGQQSSS 244

Query: 258 GSLRRLLDGIERLTEGELGDTQGLKLLPQRARIKLDAWQNCLLDAGSSDFRQLLKDKTAA 317
            ++   L  + ++ + EL DT  +    QR   KL  W N L     SD+R LL +K+ A
Sbjct: 245 RTIDDYLQKLLQIYQTELSDTGQIAQFCQRCLAKLSDWHNGLFSIAESDWRVLLGNKSIA 304

Query: 318 LAAGELIAELSALEALLLANVGRSEPLDDFAVKLPELKQKLERFIACDDPGSAYSIDIGE 377
           LA+ +L+AEL+AL+ LLLA+VGRSE LDD AVKL EL  KL  F  CD+P +AYS++ G 
Sbjct: 305 LASWDLLAELTALQKLLLAHVGRSELLDDIAVKLAELNHKLNHFFQCDNPQAAYSVEFGS 364

Query: 378 RHLMLRISPIDIAKACSELFSEDTAWVFTSATLQVERSLQFFTRELGLTSAKPVSAKRSQ 437
           R +MLRISPI+IA+ C +LF  +T+W+FTSATLQV RSL  F +ELG++ A         
Sbjct: 365 RFVMLRISPINIARECQQLFVANTSWIFTSATLQVNRSLAHFAKELGISDA--------- 415

Query: 438 SGAGAKSAVCKEVLLDSPFDYPRQSLLCVPRRLGSVANQDAMVCQLTEVCLKLIRAAKGR 497
                     K  +LDSPFDYPRQ+L CVPR+LG+VANQ   + QL +VC+K I AA+GR
Sbjct: 416 ----------KAHILDSPFDYPRQALFCVPRQLGNVANQQQALKQLVDVCVKAIEAAQGR 465

Query: 498 TFILFTSHRMMEAVARSLVGRCHYPLLVQGQGGKQQLLSKFRQLGEAVLLGTGSFWEGVD 557
           TFILFTSH+M+E  A +L  R  YPLLVQGQ GKQ LL+KFRQLG AVLLGT SFWEGVD
Sbjct: 466 TFILFTSHKMLEQTALALRTRTQYPLLVQGQAGKQSLLTKFRQLGNAVLLGTSSFWEGVD 525

Query: 558 VRGKLLSCVIIDKLPFASPDDSLYKARASRVEARGGDPFLEISLPQAVIALKQGAGRLIR 617
           VRGKLLSCVIIDKLPF SPD+ LY+ARA  +  +GGDPF ++SLPQA+IALKQG GRLIR
Sbjct: 526 VRGKLLSCVIIDKLPFVSPDEPLYRARADNISRQGGDPFTQVSLPQAIIALKQGVGRLIR 585

Query: 618 DETDRGVLVICDNRLVNRPYGQAFLQSLPPMARTRDLDEACAFLAAI 664
           DE D GVL++CDNR+VNR YGQAFL SLPPMARTRDL++A AFL  I
Sbjct: 586 DEKDCGVLILCDNRIVNRAYGQAFLNSLPPMARTRDLEQALAFLRQI 632