Pairwise Alignments

Query, 665 a.a., ATP-dependent helicase DinG (RefSeq) from Shewanella amazonensis SB2B

Subject, 681 a.a., ATP-dependent DNA helicase from Lysobacter sp. OAE881

 Score =  396 bits (1017), Expect = e-114
 Identities = 255/691 (36%), Positives = 361/691 (52%), Gaps = 60/691 (8%)

Query: 8   NNLITRTQAVFDEGGLLSRFIRGYRRREVQQQMAEEVASCLSHTHKLVLEAGTGVGKTFA 67
           + L   ++    EGG L++ I  +  R  Q  +A  VA  +     L+ EAGTG GKTFA
Sbjct: 3   SRLAQASREALSEGGELAKNIPSFSSRPAQLDLAAAVADAMDRRGTLLAEAGTGTGKTFA 62

Query: 68  YLVPALLSGKQVIVSTGSKNLQEQLFYKDLPALLEMLKLHLPVSILKGRSNYLCQ-RLMA 126
           YLVPALLSGK+ IVSTG++ LQ+QL+++DLP + + L + L  ++LKGR+NYLC  R+  
Sbjct: 63  YLVPALLSGKKTIVSTGTRALQDQLYHRDLPRVRDALGVGLKTALLKGRANYLCHYRMRQ 122

Query: 127 AQMEAAFSHDEKLLDDLLKLNQFAQTTEDGDLGNLTGVAEDARAISLVASTQDSCTGQRC 186
           AQ E  F+    +     ++  ++  T  GD+  L  + ED+  + +V ST ++C G  C
Sbjct: 123 AQGEPRFT-SRDMAAQFQRIVAWSGRTRMGDMAELDALPEDSPLLPMVTSTAENCLGSEC 181

Query: 187 AFYEDCFTRKARARAMNARLIVVNHHLFFADRVLKDTGFAELLPDVDAVIFDEAHLLPDI 246
            F+ DCF  +AR RA  A L+VVNHHL  AD  LK  GF E+LP     + DEAH LP++
Sbjct: 182 PFFNDCFVVQARQRAQAADLVVVNHHLLLADLALKQEGFGEILPGAQTFVVDEAHQLPEL 241

Query: 247 AMQYFGAQLSTGSL----RRLLDGIERLTEGELGDTQGLKLLPQRARIKLDAWQNCLLDA 302
           A Q+FG  LS   L    R  L   +++        +  + L Q  R    A     +  
Sbjct: 242 AAQFFGEALSARPLVELARDALTECKQVPSALAAVQEPARALEQGVRAVRAAMDELPV-- 299

Query: 303 GSSDFRQLLKDKTAALAAGELIAELSALEALLLANVGRSEPLDDFAVKLPELKQKLERF- 361
                R+  +D     A   L A L A  A ++     S   D  A +  E + +L+R+ 
Sbjct: 300 -RGTRRRAAEDANVEAAFDALDAALRAFHAAVVPYASASPGFDACAARAVEFEGRLKRWR 358

Query: 362 -----IACDDPGSAYSIDIGE------------------------RHLMLRISPIDIAKA 392
                   +D  +A S++  E                        R   L  +P+D+A  
Sbjct: 359 DGEDVPVDEDEENADSVETTEAADSDAKPSRKHADESVLWYELTARGFRLSRTPLDVAGP 418

Query: 393 CSE-LFSEDTAWVFTSATLQVERSLQFFTRELG--LTSAKPVSAKRSQSGAGAKSAVCKE 449
            ++       AW+FTSATL V    + F  +LG  L    P                   
Sbjct: 419 LAQHRARSQAAWIFTSATLAVGGRFEHFAIKLGLYLKGEDPPHT---------------- 462

Query: 450 VLLDSPFDYPRQSLLCVPRRLGSVANQDAMVCQLTEVCLKLIRAAKGRTFILFTSHRMME 509
           +L+ SPFD+  Q+L  +PR L     +      + +V   ++ A+ GR F+LF SHR + 
Sbjct: 463 LLVPSPFDWETQALCYLPRGLPEPIVRHYNESMIDKV-RPVLEASNGRAFVLFASHRALR 521

Query: 510 AVARSLVGRCHYPLLVQGQGGKQQLLSKFRQLGEAVLLGTGSFWEGVDVRGKLLSCVIID 569
             A  L+    +PL VQG+  +  LL +FR  G  VLLG  SF EGVDV G  LS V+ID
Sbjct: 522 EAA-ELLKDGPWPLFVQGEAPRAVLLERFRASGNGVLLGAASFREGVDVAGDALSVVVID 580

Query: 570 KLPFASPDDSLYKARASRVEARGGDPFLEISLPQAVIALKQGAGRLIRDETDRGVLVICD 629
           KLPFA+PDD +++AR   +   GG+PF +  LPQAVIALKQGAGRLIR+E DRGVLV+CD
Sbjct: 581 KLPFAAPDDPVFEARLDAIRRNGGNPFRDEQLPQAVIALKQGAGRLIRNENDRGVLVLCD 640

Query: 630 NRLVNRPYGQAFLQSLPPMARTRDLDEACAF 660
            RL ++ YG  FL SLPP+ +TR +++  AF
Sbjct: 641 PRLTSKTYGSVFLNSLPPLPKTRRVEDVAAF 671