Pairwise Alignments

Query, 331 a.a., membrane-bound lytic murein transglycosylase B (RefSeq) from Shewanella amazonensis SB2B

Subject, 433 a.a., lytic murein transglycosylase from Rhodopseudomonas palustris CGA009

 Score =  133 bits (335), Expect = 7e-36
 Identities = 92/323 (28%), Positives = 148/323 (45%), Gaps = 8/323 (2%)

Query: 8   SLSALALMSATVMAQSADS--GG--FADYLAGLKDVAASQNQIRPQTLDTVFPKIKEFRL 63
           ++SA  L+S+   AQ   S  GG  F  +LAGLK  A +    +    +     + +  +
Sbjct: 7   AISAATLLSSPAFAQRGASCHGGQSFPQFLAGLKQKAVAAGVSQGAIAEASPYLVYDQGI 66

Query: 64  AKSDTGEPAAAPATNLDTFLPQTLNDALVDEAKFQYQGHAETLNRIGKQYGVQPRFIVAL 123
              D G+        +  F  +  ++    + +   + +A    R  K+YGV P  I A 
Sbjct: 67  VNRDRGQRVFGQIFTV--FAGRMASEGRRVKGQQLIKQYANAFARAEKEYGVPPAVITAF 124

Query: 124 WGLESRYGRESGVYPVLSVTASKAFNKEKEAFFREQFFAALKIIDSSSWQPDDLLATPDG 183
           W LES +G   G  P L    S A++  +   F+++  AALKIID     P +++ +  G
Sbjct: 125 WALESDFGAVQGNLPTLRSLVSLAYDCRRSEMFQDETIAALKIIDRGDLTPGEMIGSWAG 184

Query: 184 RMGQPKLLPQAFLSAAKDGDDDGKADIWSNPADVFATLA-YSLQQAGWREDETWGRQVKI 242
            +GQ + LP+ +   A D D DG  D+  +  DV  + A Y      WR  E W ++V++
Sbjct: 185 ELGQTQFLPRHYFDYAVDYDGDGHRDLLHSAPDVIGSTANYIATGLKWRRGEPWLQEVRV 244

Query: 243 PGDFDMSQAAAGNKKSFSQWQALGVRRFDGTDLPARADMKVEMVMPDGPKGRVYLVYDNY 302
           P +    QA    K   SQW   GV   DG  L   A +   +++P G  G  +L Y N+
Sbjct: 245 PENLPWDQADLTVKHPRSQWAQWGVTTADGRPLSNDA-LPASLLLPMGRHGPAFLAYANF 303

Query: 303 LALKRWHDSDYFALAVVHLSDRI 325
            A   W++S  ++    +L+ RI
Sbjct: 304 AAYTEWNNSLIYSTTAAYLATRI 326