Pairwise Alignments

Query, 331 a.a., membrane-bound lytic murein transglycosylase B (RefSeq) from Shewanella amazonensis SB2B

Subject, 416 a.a., peptidoglycan binding domain protein from Marinobacter adhaerens HP15

 Score =  173 bits (439), Expect = 6e-48
 Identities = 106/321 (33%), Positives = 166/321 (51%), Gaps = 11/321 (3%)

Query: 6   CTSLSALALMSATVMAQSADSGGFADYLAGLKDVAASQNQIRPQTLDTVFPKIKEF-RLA 64
           C SL A+A  SA V     +  GFA+  A L++ A +   +  +T   V   ++   R+ 
Sbjct: 26  CLSLPAIAQDSAEV-----EPAGFAECKARLQEQAIAAG-VSSKTASEVMSGVQHLARVI 79

Query: 65  KSDTGEPAAAPATNLDTFLPQTLNDALVDEAKFQYQGHAETLNRIGKQYGVQPRFIVALW 124
           + D  +P     T    +L + +NDA V+  +   Q H E L R+ ++ GV   ++VA W
Sbjct: 80  ELDRRQPEFT--TTFADYLNRRVNDARVNTGRELLQEHQELLARVTRETGVPAPYLVAFW 137

Query: 125 GLESRYGRESGVYPVLSVTASKAFNKEKEAFFREQFFAALKIIDSSSWQPDDLLATPDGR 184
           GLE+ +G   G  PV S   + A +  +  FF EQ  AAL+IID  +   D +  +  G 
Sbjct: 138 GLETNFGSYFGKMPVPSSLTTLACDPRRSTFFTEQLIAALRIIDEGAIPADQMEGSWAGA 197

Query: 185 MGQPKLLPQAFLSAAKDGDDDGKADIWSNPADVFATLAYSLQQAGWREDETWGRQVKIPG 244
           MG  + +P  FL  A D D DG+ D+W++  D   +    L+   W  D  WGR+V +P 
Sbjct: 198 MGHVQFMPTVFLKHAVDADGDGRRDLWNSLPDAMMSAGRFLESMNWDGDYRWGREVLLPE 257

Query: 245 DFDMSQAAAGNKKSFSQWQALGVRRFDGTDLPARADMKVEMVMPDGPKGRVYLVYDNYLA 304
           +FD S  A G +    QW+ +G+    G  L AR  +   +V+P G +G  +L Y N+  
Sbjct: 258 NFDYS-LADGRRLPLEQWRKMGITDAFGKPL-AREPINAALVVPAGHRGPAFLAYHNFRV 315

Query: 305 LKRWHDSDYFALAVVHLSDRI 325
           +  W+ S+++A+AV HL+DRI
Sbjct: 316 IMGWNRSEFYAIAVGHLADRI 336