Pairwise Alignments

Query, 604 a.a., AsmA protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 741 a.a., Uncharacterized protein involved in outer membrane biogenesis from Pseudomonas stutzeri RCH2

 Score =  110 bits (274), Expect = 3e-28
 Identities = 98/393 (24%), Positives = 166/393 (42%), Gaps = 26/393 (6%)

Query: 2   KLIKWIFAGIAAIAVLVVLYITLIFDPNDFKPMLVDAVKEQTGRDLVIEEPLSWQFFPSI 61
           K++  +F G+  I V     +T +FDPND+K  + D  + + G +L I+  + W  FP +
Sbjct: 6   KILGLVFLGLLLILVAAGFALTHLFDPNDYKDEIRDLARSKAGLELDIKGDIGWSLFPWL 65

Query: 62  GIRLAGVSLSNPEGFKEAHMMAVKEVVAEVKLLPLLSRDVQIDQLRLDGAKLTLVTTKQG 121
           G+ L   +L++ +   E     ++ +   V+++PLLSR+VQ+  ++++G  LTL   ++G
Sbjct: 66  GLELHETTLASAQ-TPEQPFADLRMLGLSVRVMPLLSREVQMSDIKVNGLNLTLNRDEKG 124

Query: 122 KSSLDGLTGNTTSADKPA-----------DVKQGPGLN----AISIGGINISDTSITLID 166
           + + +G+       ++PA              Q P        + I  + +SD  +T  D
Sbjct: 125 RGNWEGVGQPAKQPEQPAQTPKASEPSPEQADQAPASRNKPLTLDIDSLTVSDARVTYHD 184

Query: 167 EAAGSSQTFTLSSLTLGEFTPGKAAP--LAFAFGADLPDMKVKGEGEATLTVSEAFNALS 224
              G   +     LT G    G + P  L   FG++ P M+ + E +  L          
Sbjct: 185 AKTGQQYSAESIELTTGAIREGSSIPVKLNAFFGSNQPVMRARTELQGALRFDNQLKRYQ 244

Query: 225 LVGLNLEVNAQGNSLPKGAVTVEFAGGADVALEAKTAKLTVDKLTLMDIEGKGAIAANYG 284
              + L   A G  L    +T    G   V L A+ A+    K T   + G G + A   
Sbjct: 245 FEDMRLSGEASGEPLQGQTLTFSAQGQLLVDLAAQIAEWNSLKFTANQLRGLGELKARDL 304

Query: 285 KKVPFVDVELAFGAIDVDAIL-GT-EKSQTKADSTAPDTAQKEPDLSG----MKAVDAKL 338
            K   +   L     ++   L GT +K    AD      A+    LSG    +   +  L
Sbjct: 305 DKEAKISGALTVAQFNLREFLQGTGQKLPAMADGATLSKAELVSRLSGTPNSIALEELTL 364

Query: 339 KLDIAAV--KVAGLSTADWALRANLAGGVLKVD 369
           KLD +    ++A    A  ALR +L G    +D
Sbjct: 365 KLDDSTFTGRLAVSDFARQALRVDLKGDRFNLD 397



 Score =  105 bits (261), Expect = 9e-27
 Identities = 115/447 (25%), Positives = 182/447 (40%), Gaps = 36/447 (8%)

Query: 184 EFTPGKAAPLAFAFGADLPDMKVKGEGEATLTVSEAFNALSLVGLNLEVNAQGNSLPKGA 243
           +FT  +   L      DL D + K  G  T+        L   G  L   A G +L K  
Sbjct: 287 KFTANQLRGLGELKARDL-DKEAKISGALTVAQFNLREFLQGTGQKLPAMADGATLSKAE 345

Query: 244 VTVEFAGGAD-VALEAKTAKLTVDKLT-------------LMDIEGKGAIAANYGKKVPF 289
           +    +G  + +ALE  T KL     T              +D++G      N  + +P 
Sbjct: 346 LVSRLSGTPNSIALEELTLKLDDSTFTGRLAVSDFARQALRVDLKGD---RFNLDRYLPP 402

Query: 290 VDVELAFGAIDVDAILGTEKSQTKADSTAPDTAQKEP--------DLSGMKAVDAKLKLD 341
              E A  A     +  T+ S   + +T    A  +          L  ++ +D ++ L 
Sbjct: 403 PSKEQAAEAARKSEVKSTQASAIGSGTTPLPNAPTQQAWSDATVLPLEQLRKLDTEVNLA 462

Query: 342 IAAVKVAGLSTADWALRANLAGGVLKVDELKASLYGGKVGASATLDGRKVPAVYSFNKAI 401
           I ++    +    + L+A    G+L + E++A LYGG++  SA+LD R    + +     
Sbjct: 463 IGSLTAMKIPLDGFNLKARTRNGLLTLQEMRAGLYGGRLDGSASLDVRPALPLLTVQNRF 522

Query: 402 TGVQILPLLKDAAEVDLLAGTANFDIQGKGAGLLADNIKRNLNANGKFEVADGALYGVNV 461
            GV +  LL+   E  ++ G  N D   +  G        NLN    F + +G L   N+
Sbjct: 523 NGVPVERLLESQGEDVVVKGLLNLDADLRTQGNSEKAWIDNLNGKVGFIIDNGVLVDANL 582

Query: 462 PQMIRDAQAKLKGDLNAAAGGEEKKTDFSSLTGSLNIAAGKANNPDLLMLSPLLRISGQG 521
            Q +  A A L      A+    K T F  L G+L +  G A+NPDL    P L ++G+G
Sbjct: 583 EQQLCRAIATLNRK-PLASDPRSKDTPFRELKGNLTLRNGVASNPDLKASIPGLTVNGKG 641

Query: 522 GADLMAETLDYKLATKVVGSLEGQGGDTA------LAGIEIPLAITGSFTEPKFA--LDT 573
             DL    +DY++   + G  +G   D A        GIE PL   G       A   D 
Sbjct: 642 DVDLRVLGMDYRVGILIEGD-KGAMPDPACQVNERYVGIEWPLRCRGPLELGAKACRFDN 700

Query: 574 EALLKGQLKGETDKLKDKLKDSLFKKL 600
           +AL K   +   +KL +K+++ L  K+
Sbjct: 701 DALGKVAARLAGEKLNEKIEEKLGDKV 727