Pairwise Alignments

Query, 243 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 266 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  228 bits (581), Expect = 9e-65
 Identities = 113/230 (49%), Positives = 157/230 (68%), Gaps = 1/230 (0%)

Query: 5   LLSLALPLLSINAYAQNS-LSPFEADYKVLYGDIGLGKAHFSLPAPEGNYYEYNFTSELS 63
           L+SL     SI A A  + L+P  A+Y+V YGDI LGKA + LPA E   Y+Y F S+LS
Sbjct: 8   LVSLTALTHSIFAMAAPTPLTPQTAEYQVNYGDIELGKAKYHLPAAEDGIYKYRFDSDLS 67

Query: 64  LLFLSDERSIKSKFRRTDHGLEPMVFIHQRTGTGSDFSEQVAFLKDKSIVRSNYKGEHVE 123
           LL L+D R + S+F +  + L PM ++H R G G  F+EQ AF K +  + + YK E  +
Sbjct: 68  LLLLTDVRHVLSEFSQEGNQLLPMRYLHDRQGVGPTFTEQTAFAKAQGFIHTRYKDEKGK 127

Query: 124 LPFENKLYDTMMVQLQFRQDLIEGKDSLEYHMVKDNEIDDYSFKRMGEEVLNIDGTEYRT 183
            PFE  ++D +MVQLQFR D+  GK+ L+Y M+K NE+D+Y F+ +G+E + I+   Y T
Sbjct: 128 YPFEGDIFDPLMVQLQFRLDISTGKEVLDYKMIKSNELDEYKFRVIGKERMTIESGSYDT 187

Query: 184 LRLEVIRDSKKRKTVVWMAPDLAYLPVRMTHFEKGDKQLDVQLTGYRFSD 233
           +++EV+RD+ KR+T  WMAPDLAYLPVR+THFEKG KQLD++L  Y F +
Sbjct: 188 VKIEVVRDNNKRQTFFWMAPDLAYLPVRLTHFEKGSKQLDIKLLSYHFDN 237