Pairwise Alignments

Query, 664 a.a., thiamine biosynthesis protein ThiC (RefSeq) from Shewanella amazonensis SB2B

Subject, 917 a.a., phosphomethylpyrimidine synthase ThiC from Bifidobacterium breve UCC2003

 Score =  674 bits (1740), Expect = 0.0
 Identities = 361/635 (56%), Positives = 425/635 (66%), Gaps = 71/635 (11%)

Query: 37  DIQVGMRQIHQTDTRIVNTRGEETFEANPPIKVYDCAGPYSDPNADINVRRGLPKLREGW 96
           D++V   +I  +DT  V          NPP   Y   GP  DP      + GL  LR  W
Sbjct: 328 DLEVPYTEIKLSDTPGVGP--------NPPFHDYSTEGPKCDP------KEGLKPLRLDW 373

Query: 97  ILARSDTEELNSASSNFTQQRLADDGLDHLRFDVLPK--------PRRAKAGKRVTQLHY 148
           I  R D E+      N     L DDG   ++     K        P RAK    +TQ+ Y
Sbjct: 374 IRDRGDIEDYEGRRRN-----LEDDGKRAIKRGRATKEWRGRKHQPMRAK-DHPITQMWY 427

Query: 149 ARQGIITPEMEYIAIRENMARDEVTDEQLNRKKPGEAFGALVSKPITPEFVRDEVARGRA 208
           AR GIITPEM+Y+A REN                              E VR E+A GRA
Sbjct: 428 ARHGIITPEMQYVATREN---------------------------CDVELVRSELAAGRA 460

Query: 209 IIPANINHPEAEPMIIGRNFLVKVNANIGNSAVTSSIEEEVEKLVWSTRWGADTVMDLST 268
           ++P NINHPEAEPMIIG  FL K+NAN+GNSAVTSSI+EEVEKL W+T+WGADTVMDLST
Sbjct: 461 VMPCNINHPEAEPMIIGSAFLTKLNANMGNSAVTSSIDEEVEKLTWATKWGADTVMDLST 520

Query: 269 GRYIHETREWIVRNSPVPIGTVPIYQALEKVNGIAEDLNWEVFRDTLIEQAEQGVDYFTI 328
           G  IH TREWI+RNSPVPIGTVP+YQALEKV   A  L+WE+FRDT+IEQ EQGVDY TI
Sbjct: 521 GNDIHTTREWILRNSPVPIGTVPMYQALEKVEDDASKLSWELFRDTVIEQCEQGVDYMTI 580

Query: 329 HAGVLLRYVPMTAKRVTGIVSRGGSIMAKWCLSHHQENFLYTHFRDICELCAAYDVSLSL 388
           HAGVLLRYVP+TA RVTGIVSRGGSIMA WCL HHQE+FLYTHF ++C++ A YDV+ SL
Sbjct: 581 HAGVLLRYVPLTANRVTGIVSRGGSIMADWCLRHHQESFLYTHFDELCDIFAKYDVAFSL 640

Query: 389 GDGMRPGSIADANDEAQFAELETLGELVKIAWEYDVQTIIEGPGHIPMQLIKENMDKQLE 448
           GDG+RPGS+ADAND AQ +EL TLGEL + AW  DVQ +IEGPGH+P   ++ N++ +  
Sbjct: 641 GDGLRPGSLADANDAAQLSELMTLGELTERAWAKDVQVMIEGPGHVPFDTVRMNIELEKA 700

Query: 449 HCAEAPFYTLGPQTTDIAPGYDHFTSGIGAAMIAWYGCAMLCYVTPKEHLGLPNKEDVKQ 508
            C  APFYTLGP TTD APGYDH TS IGA  I  YG AMLCYVTPKEHLGLPNK+DVKQ
Sbjct: 701 VCHNAPFYTLGPLTTDTAPGYDHITSAIGATEIGRYGTAMLCYVTPKEHLGLPNKDDVKQ 760

Query: 509 GLIAYKIAAHAADVAKGHPGAQIRDNALSKARFEFRWEDQYNLGLDPDTARAYHDETLPQ 568
           G+IAYKIA HAAD+AK HP AQ RD+A+SKARFEFRW DQ+NL  DPDTA A+HDETLP 
Sbjct: 761 GVIAYKIACHAADIAKHHPHAQDRDDAISKARFEFRWLDQFNLSYDPDTAIAFHDETLPA 820

Query: 569 ESAKVAHFCSMCGPKFCSMKITQDVR--------------DYAASLENAARSEADSVQTL 614
           E AK+AHFCSMCGPKFCSM I+Q++R              + AA +++ A ++A +    
Sbjct: 821 EPAKMAHFCSMCGPKFCSMAISQNIRKAFGGEAAQQQIVKEAAAGIDSEALAKAKANVDN 880

Query: 615 EVGAAESYSKAESYARAGMDKMSATFKQTGSALYS 649
           +V +A   S  E    AGMD MS  +   G  LYS
Sbjct: 881 DVVSANVLSPEE--ILAGMDAMSEKYTAQGGKLYS 913