Pairwise Alignments

Query, 330 a.a., methyltransferase, putative (RefSeq) from Shewanella amazonensis SB2B

Subject, 318 a.a., tRNA (5-methoxyuridine) 34 synthase from Pseudomonas fluorescens FW300-N1B4

 Score =  345 bits (885), Expect = e-100
 Identities = 175/327 (53%), Positives = 228/327 (69%), Gaps = 14/327 (4%)

Query: 1   MISFSSFYRQIADTQLQHWLESLPAILGEWQRQHKHGNLPKWEKVLAKLHYPAPEFLDLK 60
           MI  S   R++A T L  W  +L A L + + +  HG+L +W+  L  L    P  +DL 
Sbjct: 1   MIDLSPLARRLAGTPLAEWANTLQAQLDK-KMEKGHGDLERWQSALDALPKIQPSEVDLL 59

Query: 61  DSVTIGDGLQLDSG---QTE-KLENLLKILQPWRKGPFHVHGIHIDTEWRSDWKWDRVSP 116
           +      GL+LD+    QT  ++   L  L PWRKGPF + G+H+DTEWRSDWKW RV+P
Sbjct: 60  N------GLKLDTDCDDQTRAQMRTALMGLSPWRKGPFDLFGVHVDTEWRSDWKWSRVAP 113

Query: 117 HLSPLTNRTVLDVGCGSGYHMWRMLGAGAKRVVGIDPSALFLCQFEAIKRLIDTELPVHL 176
           HL  L  + +LDVGCG+GY+MWRMLGAGA  V+G+DP+ LF CQF+A++R +      HL
Sbjct: 114 HLD-LKGKRILDVGCGNGYYMWRMLGAGADSVIGVDPNWLFFCQFQAVQRYLSEPNAWHL 172

Query: 177 LPLGIEELPP-LDAFDTVFSMGVLYHRRSPIDHLLQLRDQLRMGGELVLETLVVDGDKDT 235
            P   E+LPP L+ FDTVFSMGV YHRRSPI+HLL L+D L  GGELVLETLV++GD+  
Sbjct: 173 -PFPFEDLPPSLEGFDTVFSMGVFYHRRSPIEHLLALKDCLVKGGELVLETLVIEGDQQQ 231

Query: 236 VLVPQDRYGKMNNVWFLPSIDALKLWLEKCDFTDVRCVNVDVTSLAEQRSTPWMQNESLV 295
           VLVP+DRY +M NVWFLPS+ AL+LWL +  F+DVRCV+V VT++ EQR T WM+ +SL 
Sbjct: 232 VLVPEDRYAQMRNVWFLPSVPALELWLRRAGFSDVRCVDVSVTTVEEQRGTEWMKYQSLS 291

Query: 296 DYLDPKDVNLTVEGYPAPKRATFIAVK 322
           D+LDP+D + T+EG PAP RA  +A K
Sbjct: 292 DFLDPQDHSKTIEGLPAPMRAVIVARK 318