Pairwise Alignments

Query, 213 a.a., endonuclease III (RefSeq) from Shewanella amazonensis SB2B

Subject, 225 a.a., endonuclease III (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  164 bits (416), Expect = 9e-46
 Identities = 84/213 (39%), Positives = 133/213 (62%), Gaps = 3/213 (1%)

Query: 1   MNNQKRVE-ILTRLRANNPKPETELNFSSPFELLVAVTLSAQATDVSVNKATDKLFPVAN 59
           M  ++R E ++   +AN P  ETEL++++P+ELL+AV LSAQ TD  VN  T  L+    
Sbjct: 1   MRKKERYEKVIAWFQANVPVAETELHYNNPYELLIAVILSAQCTDKRVNMITPPLYKDFP 60

Query: 60  TPQAIVDLGVEGLKEYIKTIGLFNNKAINVVKLSQILLDKHGGEVPEDREALEALPGVGR 119
           TP+A+     E + EYI+++   NNKA ++V ++++L++    +VP++ + L  LPGVGR
Sbjct: 61  TPEALAASTPEVIFEYIRSVSYPNNKAKHLVGMAKMLVNDFNSKVPDNMDDLIKLPGVGR 120

Query: 120 KTANVVLNTAFGWPTIAVDTHIFRMANRTRFAPGK--NVVEVEERMLKVVPAEFKVDVHH 177
           KTANV+ +  F    +AVDTH+FR+++R    P        VE+ ++K +P +     HH
Sbjct: 121 KTANVIQSVVFNKAAMAVDTHVFRVSHRIGLVPDSCTTPFSVEKELVKNIPEKLIPIAHH 180

Query: 178 WFILHGRYTCLARKPRCGSCIIEDLCEFKDKVY 210
           W ILHGRY C AR P+C +C ++ +C++    Y
Sbjct: 181 WLILHGRYVCQARTPKCDTCGLQMMCKYFCNTY 213