Pairwise Alignments

Query, 230 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 227 a.a., cytochrome biogenesis protein from Pseudomonas fluorescens FW300-N2E3

 Score =  216 bits (549), Expect = 4e-61
 Identities = 109/218 (50%), Positives = 145/218 (66%), Gaps = 9/218 (4%)

Query: 5   LSGAFLVGLMGGVHCFGMCGGLLGAFSSQIPAPPRHENPLAHRLGFLLSYNSGRIASYTL 64
           L  A ++GL+GG HC GMCGGL+GA +  IP   R     + R   LL+YN GRI SY  
Sbjct: 8   LVSAVILGLLGGGHCLGMCGGLMGALTLAIPKEQR-----SRRFRLLLAYNLGRILSYAT 62

Query: 65  AGAIAGGASGGLSLLFDAGHLTLFLRFLAGLMMILLGLYVAKIWSGVVFIETLGKGLWRV 124
           AG + G A   ++         +F+R LAGL++I +GLY+A  WSG+  IE+LG+GLWR 
Sbjct: 63  AGLLIGLAGWAVA----NSPAAMFMRILAGLLLIAMGLYLAGWWSGLTRIESLGRGLWRY 118

Query: 125 IQPFGKRLLPIDTRAKAVLAGSVWGWLPCGLVYSTLTWSVASANPLDGALIMLFFGLGTL 184
           IQP   RLLP+ +  +A+L G++WGWLPCGLVYSTL WS +  N +D AL+ML FGLGT 
Sbjct: 119 IQPVANRLLPVSSLPRALLLGALWGWLPCGLVYSTLLWSASQGNAIDSALLMLAFGLGTW 178

Query: 185 PALLSVGVAAKSLMGWLQRRAVRWLSGALLIAFGIQTL 222
           P LL+ G+AA+ +   L++R+VR   G L+I FGI TL
Sbjct: 179 PVLLATGLAAERVTALLRKRSVRMTGGLLVILFGIWTL 216