Pairwise Alignments

Query, 230 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 227 a.a., Heavy-metal-associated domain (N-terminus) and membrane-bounded cytochrome biogenesis cycZ-like domain, possible membrane copper tolerance protein from Pseudomonas fluorescens FW300-N1B4

 Score =  212 bits (540), Expect = 4e-60
 Identities = 107/218 (49%), Positives = 143/218 (65%), Gaps = 9/218 (4%)

Query: 5   LSGAFLVGLMGGVHCFGMCGGLLGAFSSQIPAPPRHENPLAHRLGFLLSYNSGRIASYTL 64
           L  A ++GL+GG HC GMCGGL+GA +  IP   R     + R   LL+YN GRI SY  
Sbjct: 8   LVSALILGLLGGGHCLGMCGGLMGALTLAIPKEQR-----SRRFRLLLAYNLGRILSYAA 62

Query: 65  AGAIAGGASGGLSLLFDAGHLTLFLRFLAGLMMILLGLYVAKIWSGVVFIETLGKGLWRV 124
           AG + G A   ++         +F+R LAGL++I +GLY+A  WSG+  IE+LG+GLWR 
Sbjct: 63  AGLLIGLAGWAVA----NSPAAMFMRILAGLLLIAMGLYLAGWWSGLTRIESLGRGLWRH 118

Query: 125 IQPFGKRLLPIDTRAKAVLAGSVWGWLPCGLVYSTLTWSVASANPLDGALIMLFFGLGTL 184
           IQP    LLP+    +A+L G++WGWLPCGLVYSTL WS +  N LD AL+ML FGLGT 
Sbjct: 119 IQPVANTLLPVSNLPRALLLGALWGWLPCGLVYSTLLWSASQGNALDSALLMLAFGLGTW 178

Query: 185 PALLSVGVAAKSLMGWLQRRAVRWLSGALLIAFGIQTL 222
           P LL+ G+AA+ +   L++R++R   G L++ FGI TL
Sbjct: 179 PVLLATGLAAERVTALLRKRSIRMTGGLLVMVFGIWTL 216