Pairwise Alignments

Query, 538 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 549 a.a., membrane protein, putative from Pseudomonas fluorescens FW300-N1B4

 Score =  402 bits (1033), Expect = e-116
 Identities = 203/489 (41%), Positives = 310/489 (63%), Gaps = 4/489 (0%)

Query: 49  VLLTSLLALIFSLFSVKYLVKPFFILLTLVSALVVFGMYKYGIVFDRAMMENIFETHSAE 108
           V++ +   ++ +L + + ++KP   L+ LVSA V + M +YG++ D  M  N  ET++ E
Sbjct: 51  VMILAAFNIVLTLLAFQSVMKPVLTLIFLVSAGVAYFMSQYGVLIDAGMFRNFAETNATE 110

Query: 109 AFMYLNTESVVGFLLLGILPAFLIAKVKIEYRVWWKELLVKSGFMLGMVSIAGGVLAGYY 168
               L+ +  V  + LG+LP++L+ K  + YR W +ELL K    +  V++ GGV    Y
Sbjct: 111 VRDLLSVKLFVFIMFLGVLPSWLLWKTPVNYRRWHRELLSKVLVSVASVAVIGGVALVNY 170

Query: 169 QDYVAFGRNNDDMKQLVVPTYYIGAAAGFVNQRYIETPLEYQPLGTDAN-NQTRDSNQKP 227
           Q   +  RN+ +++ +VVP+ YIGA+ G++ ++ +     +  LG DA  N    ++ + 
Sbjct: 171 QGLSSLFRNHHELRLMVVPSNYIGASLGYLREQVVSARQPFVKLGEDAEKNPVWQTHGRK 230

Query: 228 LLTVLLVGETARSMNYQYYGYQKDTNA-FTKPHNPIVLSATRSCGTATAQSLPCMFSRMG 286
            LTVL+VGE+AR+ N+   GY +DT     K    I  +   SCGT TA S+PCMFS MG
Sbjct: 231 SLTVLVVGESARAENFGILGYNRDTTPQLDKEAGLIAFTDVHSCGTETAVSVPCMFSNMG 290

Query: 287 REDYNARKARAQDTVIDVLDHAGVTVYWIDSDSGCKGVCDRVINETVKLDEDPALCDGES 346
           R+DY+A KA+ ++ ++DVL HAG+ V W D+ SGCKG CDRV  + V   +DPALC    
Sbjct: 291 RKDYDASKAKNEEGLLDVLKHAGLEVIWRDNQSGCKGTCDRVTVDDVSNLKDPALCANSE 350

Query: 347 CLDQVLLNRLDNILASPIEKDTLLVLHIMGSHGPTYFQRYPDEHKAFTPDCPRSDIQNCS 406
           C D++LL  L + + + ++KDT+LVLH MGSHGP YF+RYP E++ FTP C  + + NCS
Sbjct: 351 CRDEILLQGLQHFIDT-LDKDTVLVLHQMGSHGPEYFKRYPKEYEHFTPVCESNALNNCS 409

Query: 407 NEALVNTYDNTIRYSDYIMAEVINRLKQQEPVADTAMMYISDHGESLGEKGLYLHGAPYA 466
            E++VN YDNT+ Y+D++++ +I+ L+  +   DTAM+Y+SDHGESLGE  L+LHG PY 
Sbjct: 410 RESIVNGYDNTLVYTDHVLSTLIDLLRSNQDKVDTAMLYLSDHGESLGEYNLFLHGTPYM 469

Query: 467 FAPIEQISVPWLLWLSDGFKEENRLDESCLR-SLQGEWSHDNLFDSLLGWMNIHTSIYRK 525
            AP +Q  V  L W SD +++   +D  CL+ S +   S DNLF S+LG + +++ +Y  
Sbjct: 470 LAPEQQKHVAMLAWFSDSYQKSFSVDTHCLQLSREMPLSQDNLFHSMLGLLEVNSKVYDP 529

Query: 526 ELDIFSRCR 534
            LD+F+ CR
Sbjct: 530 GLDMFAGCR 538