Pairwise Alignments

Query, 544 a.a., alpha amylase, catalytic region (RefSeq) from Shewanella amazonensis SB2B

Subject, 511 a.a., Glycosidases from Pseudomonas stutzeri RCH2

 Score =  394 bits (1013), Expect = e-114
 Identities = 214/504 (42%), Positives = 293/504 (58%), Gaps = 47/504 (9%)

Query: 5   PWWRGAAIYQIYPRSLKDSNGDGIGDLQGIIERLDYIASLNVDAIWISPFFRSPMKDFGY 64
           PWW+GA +YQIYPRS  DSNGDGIGDL G++  LD++  L VDA+W+SP FRSPM D GY
Sbjct: 8   PWWKGATVYQIYPRSFADSNGDGIGDLNGVLRHLDHLQQLGVDALWLSPIFRSPMADAGY 67

Query: 65  DISDYLDVDPMFGTMDDFDELIAKAHSLGLKVVIDQVLSHTSDEHAWFAESRQSRDNPKA 124
           DISDY D+DP+FG++ D D LIA+AH+  ++V++D V +HTSDEH WF ESR SRDNPK 
Sbjct: 68  DISDYCDIDPLFGSLADIDRLIAEAHARNIRVLLDFVPNHTSDEHPWFVESRSSRDNPKR 127

Query: 125 DWYVWADPREDGTPPNNWLAIFG-GCAWEWEPRRQQYYLHNFLKSQPDLNFHCEAVRQAV 183
           DWY+W D       PNNW A  G G AW W+   QQYYLH FL  QPDLN+    V +A+
Sbjct: 128 DWYIWRD------QPNNWRAALGAGSAWTWDEHTQQYYLHLFLAKQPDLNWRNPEVVEAM 181

Query: 184 LNNVEFWLKKGVDGFRLDAITFCFHDKALRDNPAKPADKRQGRGFSE--DNPYAYQYHWY 241
            + + FWL +G+DGFR+D I     D +  D+P   A    G+  S+  D PY+++    
Sbjct: 182 HDVLRFWLDRGIDGFRIDVIHCTGKDLSFADDPRCQA----GQPLSDFNDQPYSHE---- 233

Query: 242 NNERPETLGFIEDLRALIDRYPG-AVTLGEVSSEDSLATMAEYTRGDNRLHMAYSFELLT 300
                     +  LR L+D YPG  + +GEV+   +   +  Y  GD  LH+A++F  L 
Sbjct: 234 ---------VLRGLRKLVDSYPGDRMLVGEVNIRSTERVLQYYGAGD-ELHLAFNFNPLD 283

Query: 301 KDYSAGYIRSTVEALEGAI--GDGWPCWAIGNHDVERVISRWGQGKGTPQMAKMLSAMLG 358
             +     R+ +  +E  +     WP W + NHD  R  SR+   +G+ + A+  + +L 
Sbjct: 284 APWDPVLFRTCIREVEHWLQPAGAWPTWVLSNHDNVRQRSRY---RGSERAARAAAVLLL 340

Query: 359 CLRGSLCVYQGEELGLTEADIPFDALQDPFGIAFWPNFKGRDGCRTPMPWQAEGEYMGFG 418
            LRG+  +YQGEELGL +A I  +A  DP          GRDGCR P+PWQAE  + G+ 
Sbjct: 341 TLRGTPFIYQGEELGLEDAHIRDEARIDP---------GGRDGCRAPIPWQAEPPH-GW- 389

Query: 419 ATASGAMPWLPLPEEHRALNVAAQSANPDSVLNQFSRFMAWRRTQPALVTGEIKFIDSKE 478
               GA PWLP P +   L    Q+   +S+   + R +A R+  PAL  G+ + + S  
Sbjct: 390 ---QGAEPWLPFPPDAAELAAERQTGAANSIFALYQRLLAARKASPALHHGDFEELASHP 446

Query: 479 PVLAFERVSSDKKVLCVFNLSDKP 502
            VLA+ R   D   L   N S++P
Sbjct: 447 EVLAYRRQHGDDCRLVCINFSEQP 470