Pairwise Alignments

Query, 544 a.a., alpha amylase, catalytic region (RefSeq) from Shewanella amazonensis SB2B

Subject, 526 a.a., alpha amylase catalytic region (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  367 bits (942), Expect = e-106
 Identities = 205/501 (40%), Positives = 279/501 (55%), Gaps = 14/501 (2%)

Query: 5   PWWRGAAIYQIYPRSLKDSNGDGIGDLQGIIERLDYIASLNVDAIWISPFFRSPMKDFGY 64
           PW     IYQ+YPRS  D+ G G GDL G+  +LDYIA L VD IW+SPF+ SP  D GY
Sbjct: 6   PWPENPVIYQVYPRSFLDTTGTGEGDLPGVTRQLDYIAGLGVDGIWLSPFYPSPFCDGGY 65

Query: 65  DISDYLDVDPMFGTMDDFDELIAKAHSLGLKVVIDQVLSHTSDEHAWFAESRQSRDNPKA 124
           DI+D+  VD  FGT+DDFD L+A+AH L L+V+ID VL+HTSD H WFA+S  +R+    
Sbjct: 66  DIADHCAVDRRFGTLDDFDALVARAHDLDLRVMIDLVLNHTSDTHDWFAKS-LAREEGFE 124

Query: 125 DWYVWADPREDGTPPNNWLAIFGGCAWEWEPRRQQYYLHNFLKSQPDLNFHCEAVRQAVL 184
           D Y+WADP +DG+PP+NWL+ FG  AW W P+R QY LH FL  QP LN + + V + + 
Sbjct: 125 DVYIWADPCKDGSPPSNWLSFFGEAAWRWHPQRAQYCLHKFLPCQPCLNHYNDRVHERLN 184

Query: 185 NNVEFWLKKGVDGFRLDAITFCFHDKALRDNPAKPADKRQGRGFSEDNPYAYQYHWYNNE 244
               FW  +GVDGFR DA+T  F+D   RDNP     +        +NPY +Q H ++  
Sbjct: 185 RITRFWRDRGVDGFRYDAVTSFFYDPGFRDNPPAAEAEAALIPGPSNNPYTFQEHIHDVL 244

Query: 245 RPETLGFIEDLRALIDRYPGAVTLGEVSSEDSLATMAEYTRGDNRLHMAYSFELLTKDYS 304
             E   F E LR +    P A  LGE+++      +     G +RL   Y+ +L  +  S
Sbjct: 245 PNECAAFAETLREMAG--PDAYLLGEINNGPRSVEVTCKFTGPDRLDAGYAIDLPERGPS 302

Query: 305 AGYIRSTVEALEGAIGDGWPCWAIGNHDVERVISRWGQGKGTPQMAKMLSAMLGCLRGSL 364
              +R  +  LE A  +GW  W + +HD +R +S +G G      AKML+A L  L G L
Sbjct: 303 TEVLRDLLTRLEDA--EGWTWW-LNSHDQKRAVSSFGDGGAAD--AKMLAAFLCALPGPL 357

Query: 365 CVYQGEELGLTEADIPFDALQDPFGIAFWPNFKGRDGCRTPMPWQAEGEYMGFGATASGA 424
            ++QGEELG  +A++    L DP+ + +WP+  GR+G R PM W       GF    S A
Sbjct: 358 LLFQGEELGQPQAELEKVELTDPYDLMYWPDSVGRNGARAPMAWDDTQPACGF----SKA 413

Query: 425 MPWLPLPEEHRALNVAAQSANPDSVLNQFSRFMAWRRTQPALVTGEIKFIDSKEPVLAFE 484
           +PWLP+    +   VA Q A+P SVL  F R    RR    L    ++  D+ +  + F 
Sbjct: 414 VPWLPMARAEQG-GVAQQEADPASVL-AFYRDALARRRDLGLAEATMELEDAPDACIRFR 471

Query: 485 RVSSDKKVLCVFNLSDKPQTM 505
                  V    N+S  PQ +
Sbjct: 472 LRVGTLVVQVAANMSGAPQDL 492