Pairwise Alignments

Query, 544 a.a., alpha amylase, catalytic region (RefSeq) from Shewanella amazonensis SB2B

Subject, 1154 a.a., alpha-amylase from Burkholderia phytofirmans PsJN

 Score =  231 bits (589), Expect = 1e-64
 Identities = 173/567 (30%), Positives = 263/567 (46%), Gaps = 128/567 (22%)

Query: 6   WWRGAAIYQIYPRSLKDSNGDGIGDLQGIIERLDYIASLNVDAIWISPFFRSPMKDFGYD 65
           W++ A IYQ++ +S  D+N DG+GD  G+I +LDYIA L V+AIW+ PF+ SP +D GYD
Sbjct: 42  WYKDAIIYQVHIKSFFDANNDGVGDFPGLIAKLDYIAELGVNAIWLLPFYPSPRRDDGYD 101

Query: 66  ISDYLDVDPMFGTMDDFDELIAKAHSLGLKVVIDQVLSHTSDEHAWFAESRQSRDNPK-A 124
           I+DY +V P +G + D    I +AH+ G++V+ + V++HTSD+H WF  +R+++      
Sbjct: 102 IADYRNVHPDYGNLSDVKRFIQEAHARGIRVITELVINHTSDQHPWFQRARRAKPGSNHR 161

Query: 125 DWYVWADPRE----------DGTPPNNWLAIFGGCAWEWEPRRQQYYLHNFLKSQPDLNF 174
           ++YVW+D  +          D  P N          W  +P    YY H F   QPDLNF
Sbjct: 162 NYYVWSDTDQKYQETRIIFIDSEPSN----------WTHDPVAGAYYWHRFYSHQPDLNF 211

Query: 175 HCEAVRQAVLNNVEFWLKKGVDGFRLDAITFCFHDKALRDNPAKPADKRQGRGFSEDNPY 234
              AV + VL  + FWL  G+DG RLDA+                             PY
Sbjct: 212 DNPAVLKEVLQVMRFWLDMGIDGLRLDAV-----------------------------PY 242

Query: 235 AYQYHWYNNER-PETLGFIEDLRALID-RYPGAVTLGEVSS--EDSLATMAEYTRGDNRL 290
             +    NNE  PET   ++ +RA ID  YP  + L E +   ED    + EY   ++  
Sbjct: 243 LVEREGTNNENLPETHAVLKKIRATIDAEYPNRMLLAEANQWPED----VKEYFGDEDEC 298

Query: 291 HMAYSFELLTKDYSA----------GYIRSTVEALEGAIGDGWPCWAIGNHD---VERVI 337
           HMA+ F L+ + Y +            +R T +    A  + W  + + NHD   +E V 
Sbjct: 299 HMAFHFPLMPRIYMSIASEDRFPITDIMRQTPDL---AATNQWAIF-LRNHDELTLEMVT 354

Query: 338 SR-----WG--------------QGKGTPQMAK------MLSAMLGCLRGSLCVYQGEEL 372
                  W               + +  P M +      +++++L  + G+  +Y G+EL
Sbjct: 355 DSERDYLWNTYASDRRARLNLGIRRRLAPLMERDRRRIELINSLLLSMPGTPVIYYGDEL 414

Query: 373 GLTEADIPFDALQDPFGIAFWPNFKGRDGCRTPMPWQAEGEYMGFGATASGAMPWLPLPE 432
           G+ +                  +   RDG RTPM W ++      G  +      L LP 
Sbjct: 415 GMGDN----------------IHLGDRDGVRTPMQWSSDRN----GGFSRADPEQLVLPP 454

Query: 433 ------EHRALNVAAQSANPDSVLNQFSRFMAWRRTQPALVTGEIKFI-DSKEPVLAFER 485
                    A+NV AQS +P S+LN   R +A RR +     G I+F+      +LA+ R
Sbjct: 455 VMGSLYGFDAVNVEAQSRDPHSLLNWTRRMLATRRAKQTFGRGTIRFLKPENRKILAYLR 514

Query: 486 -VSSDKKVLCVFNLSDKPQTMTVPGSE 511
            +  +  +LCV NLS  PQ + +  SE
Sbjct: 515 EMPGEPPILCVANLSRAPQAVELDLSE 541