Pairwise Alignments

Query, 683 a.a., alpha amylase, catalytic region (RefSeq) from Shewanella amazonensis SB2B

Subject, 686 a.a., alpha amylase, catalytic region (RefSeq) from Shewanella sp. ANA-3

 Score =  623 bits (1606), Expect = 0.0
 Identities = 335/676 (49%), Positives = 436/676 (64%), Gaps = 64/676 (9%)

Query: 48  ALNSNTLNPL-SLSQAPHSGHGVTSSSVKVEQVKVEPLNWWVGMENPQLELMITGEGVAH 106
           AL     +PL +L+QA HS    T+S      + +EPL+WW GM NP+L+LM+  + +  
Sbjct: 30  ALVLTASSPLYALAQASHSPVSSTAS------LHLEPLSWWAGMHNPKLQLMLHSDALPT 83

Query: 107 STLRLENALGAK--LLE-IIPGDSPNYLFVKLDLSTASTGILTLVLSRPASTINPATDLT 163
              +L+  +  +  L E I   D+P+YLF+ LDL  A      + +      +     L 
Sbjct: 84  DAAQLKVEITGQDVLFEGIEQTDNPHYLFINLDLRQAKPQTFDIRILAGDKQL-----LQ 138

Query: 164 IPYELKARAPGSKERQGYGNRDVMYLITPDRFANGDKANDNLPGFDDKPSNPVYSEPGNS 223
           +PY L  RA GS+ERQG+ N+DV+YLITPDRFANG+ +NDN     +      ++ P NS
Sbjct: 139 LPYTLATRAEGSRERQGFNNKDVIYLITPDRFANGNPSNDNQSDMLE------HAAPDNS 192

Query: 224 RDNARHGGDLAGIEHRLDYLNDLGVTQLWLNPLLENRQPAYSYHGYAITDFYQIDARFGS 283
             + RHGGD+ GI   LDYL  LGVTQLW+NPLLEN Q  YSYHGYA+T+ Y++D RFGS
Sbjct: 193 --DGRHGGDIEGIRQHLDYLAKLGVTQLWINPLLENNQAQYSYHGYAMTNLYRVDPRFGS 250

Query: 284 NAQYQALVRKAADRGLGVIMDVVLNHMGSGHPWMQDLPFNDWVN-PRSMH---------- 332
           N  YQ LV +A   GLGVI DVVLNH+GS H W++DLP +DW+N P+  +          
Sbjct: 251 NQDYQRLVTEAKQHGLGVIKDVVLNHIGSNHWWLKDLPSSDWLNVPQQPNATDTQTAPAA 310

Query: 333 ------------TSHRRTAVQDPYAAPKDAAAFTDGWFVDSMPDLNQRNPHLATYLIQNN 380
                       TSHRRT VQDPYA  +D   F DGWFVDSMPDLNQRNP LATYLIQN+
Sbjct: 311 SSTSLSSTNLGFTSHRRTTVQDPYADMQDKRDFVDGWFVDSMPDLNQRNPKLATYLIQNS 370

Query: 381 LWWIEYAGLSGLRIDTWSYSDKHFLKAFSEAIMAEYPHFNMVGEEWSGNPAVVSYWQRAK 440
           +WW+EYAGLSG+R DT+SY+DK FL  +++A+MAEYPHFN+VGEEW+ NP  VSYWQ+ K
Sbjct: 371 IWWVEYAGLSGIREDTYSYADKAFLTQWTKALMAEYPHFNIVGEEWTANPITVSYWQKGK 430

Query: 441 QNPDGYQTSLPGLMDFPLYEVLLQAVNEEERWGTGLIRLYEALANDMLYPHAQNLVLFEG 500
            N DGY + LP LMDFPLYE LL+++NE E W TG I+LYE LAND++Y     LVLFEG
Sbjct: 431 INADGYSSDLPSLMDFPLYEKLLESLNEPEGWDTGFIKLYEMLANDVVYATPSQLVLFEG 490

Query: 501 NHDTNRLYSLLGRDMNKFKLALAYVLLSNRVPQIFYGTEFAMQSPVEGRNDGAVRADMPG 560
           NHDTNR+YSLL  ++  +++AL YVL + R+PQ+FYGTE  M SP EGR+DG VR+D PG
Sbjct: 491 NHDTNRIYSLLKENLPLYQMALTYVLTAKRIPQLFYGTEVLMTSPTEGRHDGVVRSDFPG 550

Query: 561 FGKAGFSKSDIDAMAG-----DSKTAFEFIRALLHFRKTSDAVHRGKLVHFVPQSGLYVQ 615
               GF+ + ++  +G       + A  F+R LL++RK S A+  G L+HFVPQ+G+YVQ
Sbjct: 551 ----GFANNKVNGFSGKGLNAKQQQALAFVRTLLNYRKHSTALQTGDLLHFVPQNGIYVQ 606

Query: 616 LR----QAPDDN----PDAKNLMVIFNKNKDSVSLDMGHFTDFLPLNTDVKSVLDNRHFS 667
            R    QA   N     D   +MVI+NKN  + +LD+  F+  L  NT   SVL      
Sbjct: 607 FRCVAKQAAAGNACYQADTDKVMVIYNKNDQAQTLDLSRFSKVLAGNTSANSVLSGDKLK 666

Query: 668 LPATLTV-SSPVTLLE 682
           L  +L +  + V LLE
Sbjct: 667 LNQSLVLPHAGVMLLE 682