Pairwise Alignments

Query, 366 a.a., LacI family transcription regulator (RefSeq) from Shewanella amazonensis SB2B

Subject, 339 a.a., LacI family transcriptional regulator from Pseudomonas fluorescens FW300-N2E3

 Score =  142 bits (359), Expect = 1e-38
 Identities = 102/338 (30%), Positives = 168/338 (49%), Gaps = 17/338 (5%)

Query: 27  ATSIDIAYRAGVSQSTVSRALRDSPLVSPETKEKIRAIARELNYKVDKNASNLRTQNSHT 86
           AT  D+A  AG+S +TVS  +  +  VS E + K+ A  + L+Y     A +L+ + + T
Sbjct: 2   ATIKDVAALAGISYTTVSHVVNKTRPVSEEVRLKVEAAIKSLDYVPSAVARSLKAKTTAT 61

Query: 87  LALLLCEDPTNDDSLINPFFLSMLGSITRATAKQGYDLLVSFQQLSSDWHADYED---SN 143
           + LL+        + +NP+F  +   I     + GY +++     + D    Y       
Sbjct: 62  IGLLV-------PNSLNPYFAELARGIEDYCERNGYCVILCNSDDNPDKQRSYLRVLLEK 114

Query: 144 KADGIILLGYGDFVDYEHKLERLLAQNTHFVIWGAEHNKSTVASVGCDNQQGGLIATEHL 203
           + DG+I+   G         + L    T  VI            V  D++ G  +AT HL
Sbjct: 115 RIDGLIVASAGGDSGLA---QGLAGVRTPMVIVDRGLEGLDADMVRIDHEYGAYLATRHL 171

Query: 204 LSLGRKSVAFLGDASSHSPEFRDRYLGHVRALKDAGLVADKRCQVDAISTESAGFDAANK 263
           L LG + +A +G   +H+   + R  G+ RALK+AG+       +++  T   G++AA  
Sbjct: 172 LELGHRDIATIG-GPAHTSVAQMRLAGYCRALKEAGVEVPGEWMLESDFTSIGGYNAATM 230

Query: 264 LIRKGAQFDAIFAASDLIAIGAIRALKEAGLRVPEDVAVVGYDDIPVASFANPPLTTIKQ 323
           L+ K     AIFA +D+I IG +RA  E  +RVP +++V+G+DDI ++ +  P LTT+ Q
Sbjct: 231 LLEKHPP-SAIFAGNDMIGIGVLRAAAERNIRVPSELSVIGFDDIQMSRYVYPALTTVGQ 289

Query: 324 NTQLAGEMLVESLLKLIHGE--AVPPRLIPTSLVVRKS 359
           +    GEM  E LL+ I     A   R++  S+V+R+S
Sbjct: 290 SILQLGEMAAEVLLRRIATPELATDQRIVRPSIVMRES 327