Pairwise Alignments

Query, 366 a.a., LacI family transcription regulator (RefSeq) from Shewanella amazonensis SB2B

Subject, 351 a.a., transcriptional regulator, LacI family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  570 bits (1470), Expect = e-167
 Identities = 288/341 (84%), Positives = 315/341 (92%)

Query: 23  MASKATSIDIAYRAGVSQSTVSRALRDSPLVSPETKEKIRAIARELNYKVDKNASNLRTQ 82
           MASKATSIDIAYRAGVSQSTVSRALR+SPLV+ ET+++I+AIA+ELNYKVDKNASNLRTQ
Sbjct: 6   MASKATSIDIAYRAGVSQSTVSRALRNSPLVNLETRQRIQAIAKELNYKVDKNASNLRTQ 65

Query: 83  NSHTLALLLCEDPTNDDSLINPFFLSMLGSITRATAKQGYDLLVSFQQLSSDWHADYEDS 142
           NSHTLALLLCEDPTNDDSLINPFFLSMLGSITRATA+QGYDLLVSFQQLSSDWHADYEDS
Sbjct: 66  NSHTLALLLCEDPTNDDSLINPFFLSMLGSITRATAQQGYDLLVSFQQLSSDWHADYEDS 125

Query: 143 NKADGIILLGYGDFVDYEHKLERLLAQNTHFVIWGAEHNKSTVASVGCDNQQGGLIATEH 202
           NKADGIILLGYGD++DYE KLE+LLAQ+THFVIWGAEHN  +V S+GCDN QGGLIATEH
Sbjct: 126 NKADGIILLGYGDYMDYEQKLEKLLAQHTHFVIWGAEHNNKSVLSIGCDNHQGGLIATEH 185

Query: 203 LLSLGRKSVAFLGDASSHSPEFRDRYLGHVRALKDAGLVADKRCQVDAISTESAGFDAAN 262
           L+SLGRK+ AFLGDASSHSPEFRDRYLGH++AL+ AGL      Q+ AISTESAG+DAA 
Sbjct: 186 LISLGRKAFAFLGDASSHSPEFRDRYLGHLKALQTAGLSVVAERQISAISTESAGYDAAM 245

Query: 263 KLIRKGAQFDAIFAASDLIAIGAIRALKEAGLRVPEDVAVVGYDDIPVASFANPPLTTIK 322
            L+ KG  FDAIFAASDLIAIGAIRALKE G+ VPE VAVVGYDDIPVASFANPPLTTIK
Sbjct: 246 ALMEKGLMFDAIFAASDLIAIGAIRALKEKGILVPEQVAVVGYDDIPVASFANPPLTTIK 305

Query: 323 QNTQLAGEMLVESLLKLIHGEAVPPRLIPTSLVVRKSCGID 363
           QNTQLAGE+LVESLLKLI G+AV P+LIPT+LVVR SCGID
Sbjct: 306 QNTQLAGEILVESLLKLIRGQAVGPQLIPTTLVVRSSCGID 346