Pairwise Alignments

Query, 1297 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

Subject, 1228 a.a., hypothetical protein from Pseudomonas fluorescens FW300-N2C3

 Score =  361 bits (926), Expect = e-103
 Identities = 344/1303 (26%), Positives = 576/1303 (44%), Gaps = 127/1303 (9%)

Query: 39   VTRLVVYIPLLFLVL-LALVLGTPFGARIAVSLAASLVPNFSASYVSGTINRDLALSDIR 97
            +T L +   LL +VL L+ VLGT FG+R A+ L    VP  +     G +    +   + 
Sbjct: 7    ITLLALVGGLLAVVLALSTVLGTAFGSRWALGL----VPGLAVENFQGRLGGQWSADHLL 62

Query: 98   WSMDGIAVEGKALLVEWQPSCLLAKGLCVQNLSLDGLALVIETDKLPKGESEPAP---AT 154
            W      V    ++  W P CL    LC++ L  D +AL     +LP     P+    + 
Sbjct: 63   WQQGDSRVALDRVIFAWSPLCLARMTLCIEQLKADQVAL-----QLPASTDAPSSGPISL 117

Query: 155  EKLILPFSISLDKAQLTSVDVRVDTMKFGADYLMAAAKWQEDGLKVDELQSRGLQVFIPI 214
              L LP +I L   Q+ S+         G   L  AA W  +GL++D +Q +  ++ + +
Sbjct: 118  PDLDLPLAIELGDVQVGSLSFNGSEQLKG---LQLAAHWTAEGLQIDSVQLQRDELGLKL 174

Query: 215  PGEADTGAQGSTITSDNTAMDSAAPTEGSWPLASLPTIALPMNLQLLKADLTDTHLAILG 274
             G    G            + +   T  +  L     +   +NL+   +      L   G
Sbjct: 175  SGLLKPGGDWPLNAEGRLTLPAPGATPWALDLKVDGNLLKTLNLKADSSGYLQGQLT--G 232

Query: 275  E-----DEVISRLLLGAD-FEGSALTLQELKLEHPEAELELKGTVDLSADYPMALKLNVN 328
            E     D + +++ + AD F+ SA     L L     +LEL G  DL   Y +  K  + 
Sbjct: 233  ELQPLADNLPAKVRITADGFKASADLPDTLLLN----QLELTGEGDLKKGYQLLGKATLP 288

Query: 329  THSPSRFPDIGEQQLQLDVNGNLSQLTLKVQAKGTLNFELDAG---AALTNPEVPFTLTL 385
                      G   L L       Q T+          +LDAG   +   + +V +   L
Sbjct: 289  AEK-------GPVALLL-------QGTVDANGARIAGLDLDAGNQQSLKLSGQVDWRDGL 334

Query: 386  S-KANVGWPLQAPEYQGQEL---SVVASGNLNAQQASINGNVITPFHTPL-------LLN 434
            S +A V W L  P ++   L     V   + N + +  +GN +  F   L        L+
Sbjct: 335  SAEAKVAW-LDFPWHRLYPLIDEPQVTLRSFNGEVSYTDGNYLGNFQAALDGPAGAFSLD 393

Query: 435  AVLSHQAQSLEITEAAVSGEPGNIHLSGTLNYADGLDWRAGVSFDKLTPSALVLPEGVTL 494
            +  S     + + +  ++   G      +L +ADG+ W   +    + P+  +       
Sbjct: 394  SPFSGNLTQIHLPQLKLAAGQGKAEGHLSLQFADGIAWDTALQLSAINPAYWL------- 446

Query: 495  PKGSLDGAFETSGTFETRGTVKNQWQISLSQADIHGELAGFPVTLTGDVT-VNEKLHLSA 553
              G L G    +G   ++G +KN      +  D+ G+L G P       +   E+ +LSA
Sbjct: 447  --GELPGIL--AGPLRSKGAMKNDRLELDADLDLKGKLRGQPALFQAKASGAGEQWNLSA 502

Query: 554  QDFLLTAMGAKLTLNGNVEDDWDLQGLILAPDLSLLAEGLNGKFMANLDVSGSNKDPLVN 613
             D  L     ++   G+++     Q  I    L+ L   L G+ +  +DV+G+ K P   
Sbjct: 503  LDIRLG--DNRINGTGSLQQKLTGQIDIKLARLAQLWPQLRGQVVGRVDVAGTLKAPQGK 560

Query: 614  LQAQGEAIKFGTTQLESLAIKGLYQPFAKHEFALSLKGSALQLGSRKLESVTLGAKGDIN 673
            L  QG  +     +L+SL +        + +  L LK S ++ G   L ++T+  +GDI 
Sbjct: 561  LGLQGTQLALQDNRLQSLNLDATLDRAQRGK--LDLKASGIRAGETSLGALTVSGQGDIK 618

Query: 674  KQKLRAESFGDIRLDTVV--ESQFDEKTQLIEASVTRFDLGSEFGDWGLSQDLHLTWELA 731
            +Q L  +  G  +LDT +  +   D+       +      G +   W L     L     
Sbjct: 619  RQTLNLDLQGP-QLDTTLALDGALDQGNWRGRLASGEVQAGGQA--WRLQAPAKLE---R 672

Query: 732  SNSGTLNEA--CFTQGNNALC------LPRPATLGSTGDVAISFRGEPGAIIDKLLPTNM 783
               GTLN    C+  G  +LC      +P P        +    +  P   + + +P + 
Sbjct: 673  LTDGTLNVGAHCWRSGEASLCGEDQRLMPEPK-------LRYHLKQFPIESLAQWMPKDF 725

Query: 784  DWKGKASLDAAVDWSPKRKPAGELSLVFEPGSVTLLRPKG----KVVEVGFEALSAKASL 839
             W+G+ + D  +D  P   P G + LV   G    +R K     + ++  ++ L+  + L
Sbjct: 726  AWQGRLNADLQLDL-PASGPNGRI-LVDASGGTLRIRDKAGDKAQWLDFPYQTLTLNSRL 783

Query: 840  SPETLTADLNLRSSRLATLDSRVEIAVTP-DRALGGYIHLDRIQLEALREFLPQLDTLQG 898
            +P+ +  DLN   ++L  L  + +I   P  + L G   L  + L   R F+P ++ L G
Sbjct: 784  TPKRIDTDLNFVGAKLGELVLQAQINPLPASKPLSGSFRLTGLDLSVARPFVPMVEALTG 843

Query: 899  EISSELTLAGTLMSPEVSGNLALANGAFSASANPTLISDVDMLLAFAGQQASLNGSWVMG 958
             ++   TL+G L++P+V+GNL L++G  S    P  +  + +    AG+   L+G+W  G
Sbjct: 844  HLNGSGTLSGGLLAPQVNGNLVLSDGEVSGPELPISLEALQVRAMIAGETVRLDGAWKSG 903

Query: 959  D-GKGGIEGSLAWPDGQFSGELAVKGDKLAVIVPPMALLDVSPDVTLTFDAAMLDLKGSV 1017
              G+G + G++ W +   +  LA+KG +L V V P A+LDV+PD+ +T     L + G V
Sbjct: 904  KRGQGSLTGNIGWGEA-LTLNLALKGSQLPVTVEPYAVLDVAPDLNITMQGEQLSIAGKV 962

Query: 1018 NIPTGNIKIVQLAEGGVAVSPDVVFDDSIAEAEQKTSPYGVTADLNIRVG-DQVKIEGMG 1076
             +P G I + +L    V VS D V      + E+  +P  +  D+++ VG D++   G G
Sbjct: 963  LVPKGEITVRELPPSTVKVSDDTVIVGH--QTEEGKAPIAMAMDIDVIVGQDKLAFSGFG 1020

Query: 1077 LKGRLDGTLRLQQQAFKPPLLFGDVKVLSGSYKFMGQTLKIPKGEVQFVGPPQLPNLNIE 1136
            L   + G + +           G++ +  G Y+  GQ L + +  + F GP   P L+IE
Sbjct: 1021 LTANVQGQVHIGDNMDTR----GELWLNDGRYRAYGQRLTVRRARLLFAGPIDQPYLDIE 1076

Query: 1137 AIREIKDEDLIAGVRITGTGMAPEVTLFSNPSKEQAEILSYILKGKGFASNGSGDNNALM 1196
            AIR+   +D+IAG+R++G+   P   +FS P+  Q + LSY++ G+  ++  +G++N ++
Sbjct: 1077 AIRQ--TDDVIAGIRLSGSAEQPTTQIFSEPAMSQEQALSYLVLGRPLST--TGEDNNML 1132

Query: 1197 MGAALSLSSSLSGGAIGNIGSTATSLVEKFGFSNVQLDTNDEGR---VAISGYIGENLMV 1253
              AAL L      G +G+ G T +SL    G  + QLDT   G    V  SG + E L +
Sbjct: 1133 AQAALGL------GLMGSSGVT-SSLANNLGIDDFQLDTQGSGNTTSVVASGNLSEKLSL 1185

Query: 1254 KYGVGVFNPGYEMTVRYYLLSQLYLETVSGTVGQSLDIYYSFD 1296
            +YGVGVF P   + +RY L  ++YLE  SG V  SLDI+Y  D
Sbjct: 1186 RYGVGVFEPANTIALRYKLSKKVYLEAASG-VASSLDIFYKRD 1227